Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 VN1R9P-201ENST00000614184 867 ntBASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 AC097714.1-201ENST00000511272 1647 ntBASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 RN7SKP123-201ENST00000410732 291 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 MIR4506-201ENST00000584693 77 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 AL023284.1-201ENST00000403956 276 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 RANP7-201ENST00000418085 644 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 AL354710.1-201ENST00000453641 246 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 CEACAMP4-201ENST00000457676 421 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 AC107222.1-201ENST00000510899 637 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 AC026464.5-201ENST00000562497 722 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 MIR6715B-201ENST00000637172 77 ntBASIC3.11□□□□□ -1.91
PHRF1Q9P1Y6 AL133412.1-201ENST00000380194 2992 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 DCAF13P3-201ENST00000561147 1334 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 AC080128.1-201ENST00000474389 1917 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 ADAM3A-203ENST00000461344 2157 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 RN7SKP32-201ENST00000410167 303 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 MORF4L1P6-201ENST00000418771 268 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 MTATP6P11-201ENST00000428071 670 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 ARF4P2-201ENST00000430209 526 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 AC074029.1-201ENST00000552531 1044 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 AC006116.7-201ENST00000590141 756 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 GMCL1P2-201ENST00000605230 823 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 CR589904.2-201ENST00000612533 440 ntBASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.1□□□□□ -1.91
PHRF1Q9P1Y6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 Y_RNA.338-201ENST00000365320 114 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 SNORA80E-201ENST00000384744 137 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 RPL31P45-201ENST00000419532 356 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 AL390023.1-201ENST00000428836 262 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 CACYBPP1-201ENST00000438592 684 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 UBE2V2P4-201ENST00000447495 259 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 GSTA11P-201ENST00000452866 669 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 AC116337.1-201ENST00000509680 687 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 RNU6-1334P-201ENST00000516032 105 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 SCARNA17.1-201ENST00000516211 143 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 SCARNA17.2-201ENST00000516334 143 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 OR5BN1P-201ENST00000532955 829 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 AC103710.3-201ENST00000608157 948 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 AP001521.1-201ENST00000609150 300 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 SCARNA17.4-201ENST00000614296 143 ntBASIC3.09□□□□□ -1.91
PHRF1Q9P1Y6 BX005019.1-201ENST00000561881 1810 ntBASIC3.09□□□□□ -1.92
PHRF1Q9P1Y6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
PHRF1Q9P1Y6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
PHRF1Q9P1Y6 RNU6-1159P-201ENST00000362933 107 ntBASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 RNU1-91P-201ENST00000364746 163 ntBASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 RNU6-328P-201ENST00000390887 106 ntBASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AC234781.4-201ENST00000419384 244 ntBASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AC009487.2-201ENST00000420969 6821 ntBASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 MTCO3P11-201ENST00000455103 774 ntBASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AP003467.2-201ENST00000520175 319 ntBASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.08□□□□□ -1.92
PHRF1Q9P1Y6 AC104237.2-201ENST00000612456 443 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms