Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 MTND2P20-201ENST00000440805 661 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 RPS20P32-201ENST00000456044 356 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 U3.44-201ENST00000458938 192 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 SNORA67.7-201ENST00000516664 135 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 RNU6-1231P-201ENST00000517185 103 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 AP001636.2-201ENST00000525517 696 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 AP001269.3-201ENST00000588718 329 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 BNIP3P38-201ENST00000601117 544 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 AC006133.1-201ENST00000617106 264 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 CYP3A51P-201ENST00000633513 256 ntBASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMC4Q9NTJ3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 MTCO1P23-201ENST00000415223 1526 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 RNU6-1242P-201ENST00000391052 103 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AL590084.1-201ENST00000407885 387 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC068533.1-201ENST00000418542 415 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 USP9YP11-201ENST00000427537 717 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 ATP5JP1-201ENST00000431631 322 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 MTND2P5-201ENST00000432656 1006 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 HSPD1P21-201ENST00000436541 245 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC127537.2-201ENST00000439258 465 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 VN1R10P-201ENST00000447106 875 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 SLC31A1P1-201ENST00000451221 567 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC092757.1-201ENST00000467293 467 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 ACTG1P13-201ENST00000486987 1043 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC005921.1-201ENST00000510589 286 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC103843.2-201ENST00000530523 682 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 BNIP3P24-201ENST00000593398 557 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 SNRPGP15-201ENST00000600149 222 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 RPL23AP92-201ENST00000603609 255 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC069304.2-201ENST00000605154 435 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AC090897.3-201ENST00000636973 1157 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 AL365440.1-201ENST00000436135 2167 ntBASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMC4Q9NTJ3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 SNRPEP3-201ENST00000338402 276 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 SNORD82-201ENST00000365530 70 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 RNU6-821P-201ENST00000390995 107 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 ARF4P3-201ENST00000397387 509 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AL450338.1-201ENST00000407987 512 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 RNA5SP80-201ENST00000410475 111 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC091286.1-201ENST00000431233 461 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC073063.1-201ENST00000434352 607 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC084290.1-201ENST00000434995 374 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC007967.1-201ENST00000455422 1159 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC005410.1-202ENST00000460347 485 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 MTCO3P35-201ENST00000485582 781 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC108729.1-201ENST00000487812 947 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC008837.2-201ENST00000513076 418 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC090695.1-201ENST00000561269 1222 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AL132657.2-201ENST00000564417 358 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms