Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PSMA2P1-201ENST00000526365 646 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 ATP5F1P7-201ENST00000567330 760 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC012467.1-201ENST00000607740 256 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC112503.2-201ENST00000609005 552 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC006111.3-201ENST00000622137 383 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
TREX1Q9NSU2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
TREX1Q9NSU2 AL353743.1-202ENST00000431724 1695 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 DYNLT3P1-201ENST00000378574 347 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 RNU6-629P-201ENST00000384061 103 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 RN7SKP58-201ENST00000411010 305 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC073310.1-201ENST00000423226 1033 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC093422.3-201ENST00000428506 305 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 OR2B8P-201ENST00000432841 938 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AL445669.2-201ENST00000454425 421 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC087879.1-201ENST00000474343 374 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC015724.1-201ENST00000478577 156 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 RPS29P2-201ENST00000479278 136 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 RN7SL283P-201ENST00000489055 303 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 OR5G4P-201ENST00000525251 760 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC017100.2-201ENST00000584628 355 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 OR4G1P-201ENST00000588632 938 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AC079880.2-201ENST00000603790 1213 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 FRG1HP-204ENST00000617940 757 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 MTND5P1-201ENST00000445440 1375 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TREX1Q9NSU2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.96□□□□□ -1.94
TREX1Q9NSU2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AP002907.1-201ENST00000606361 1430 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 RNA5SP374-201ENST00000362939 125 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 SNORA38.1-201ENST00000364172 131 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 SFR1P1-201ENST00000403720 688 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 RPL5P18-201ENST00000406671 891 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 RPS20P25-201ENST00000412447 352 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AL451062.2-201ENST00000427515 271 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AC244505.4-201ENST00000434905 287 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 SETP8-201ENST00000435341 628 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 RPS29P6-201ENST00000438196 145 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 RPS26P30-201ENST00000443431 335 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 SSXP5-201ENST00000443473 287 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 MTND1P33-201ENST00000446251 917 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 RPL37P4-201ENST00000448908 268 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 BX510359.1-201ENST00000456973 237 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AC104472.2-201ENST00000469035 601 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 OR2A20P-203ENST00000498397 1268 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AC026616.1-201ENST00000523157 525 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AC006539.2-201ENST00000601729 572 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 SRGNP1-201ENST00000603392 451 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AC003001.2-201ENST00000616294 831 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 RMST_10.1-201ENST00000616309 154 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AL163051.2-201ENST00000618976 735 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AL356118.1-201ENST00000635272 1078 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AC090897.3-201ENST00000636973 1157 ntBASIC2.95□□□□□ -1.94
TREX1Q9NSU2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.95□□□□□ -1.94
TREX1Q9NSU2 AC092435.3-201ENST00000565538 3654 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms