Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RPL32P3-201ENST00000359025 275 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 SNORD116-1-201ENST00000384335 95 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 MT-TH-201ENST00000387441 69 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 MTCO1P17-201ENST00000411522 491 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 ELOCP19-201ENST00000411919 318 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 RPL7P8-201ENST00000411964 730 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC092447.6-201ENST00000414578 210 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 RPS27AP14-201ENST00000422868 454 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 CHIAP3-201ENST00000423668 1133 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 RPL18P10-201ENST00000425606 538 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 LARP1BP3-201ENST00000437229 869 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AL512286.1-201ENST00000439244 400 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AP000542.1-201ENST00000448473 371 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 FTH1P2-201ENST00000466086 412 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AP001025.2-201ENST00000490908 477 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 KCTD9P2-201ENST00000512203 1013 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 ROCK1P1-201ENST00000573767 549 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC012417.1-201ENST00000582307 1039 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 MIR544B-201ENST00000582372 78 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC073530.2-201ENST00000623987 261 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 CRYM-AS1-204ENST00000637983 556 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC116667.1-201ENST00000604855 2072 ntBASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC6A13Q9NSD5 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC006971.1-201ENST00000407916 4486 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 RNU6-335P-201ENST00000364563 113 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC025750.1-201ENST00000399891 379 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 NPM1P11-201ENST00000417106 855 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 RPS27AP7-201ENST00000422792 455 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC092832.1-201ENST00000422934 400 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AL365184.2-201ENST00000431139 435 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 RPL7P28-201ENST00000437739 740 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC118469.1-201ENST00000442943 488 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 RPL36AP33-201ENST00000450395 310 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 OR6K1P-201ENST00000456766 971 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AL122001.1-201ENST00000457027 370 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 HMGB3P30-201ENST00000457863 606 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC092754.2-201ENST00000463506 460 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 RNU6-714P-201ENST00000516963 103 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC023161.2-201ENST00000551218 780 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 GTF2IP22-201ENST00000554443 182 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 TVP23BP1-201ENST00000557500 617 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC022968.1-201ENST00000567372 442 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 MIR4644-201ENST00000579929 84 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC008507.1-201ENST00000587506 734 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC128687.1-201ENST00000605304 619 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 OR2AS2P-201ENST00000606902 342 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 AC128687.2-201ENST00000609657 566 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 C2orf27A-204ENST00000623058 969 ntBASIC3.84□□□□□ -1.79
SLC6A13Q9NSD5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms