Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM7Q9NR12 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 FRG1BP-201ENST00000278882 761 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 FRG1CP-201ENST00000358464 769 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 RNU1-39P-201ENST00000383897 165 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC068050.1-201ENST00000394891 380 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 RPL23AP32-201ENST00000395315 459 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AL590762.2-201ENST00000395798 571 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 MRPL42P2-201ENST00000403169 426 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC008280.1-201ENST00000418851 412 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC020593.1-201ENST00000507399 299 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AL359219.2-201ENST00000555184 348 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC015917.1-201ENST00000579654 510 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 MIR4429-201ENST00000580105 73 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 MIR4512-201ENST00000583257 77 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AC011477.5-201ENST00000586571 259 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 AP001836.1-201ENST00000604675 523 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 U6.101-201ENST00000637707 76 ntBASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PDLIM7Q9NR12 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 LINC00622-201ENST00000562811 1570 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 RPL23AP57-201ENST00000332361 466 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 Y_RNA.58-201ENST00000362807 102 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 Y_RNA.154-201ENST00000363624 102 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 RNY3P1-201ENST00000365085 102 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 RNY3-201ENST00000365484 102 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 Y_RNA.490-201ENST00000384413 102 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AL078604.1-201ENST00000404609 466 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 U3.35-201ENST00000408405 208 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 MTATP6P18-201ENST00000417994 673 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 BTF3L4P3-201ENST00000418879 476 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 EIF4HP2-201ENST00000424380 563 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC140076.1-201ENST00000449897 361 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC026410.2-201ENST00000460281 156 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 RPL7P15-201ENST00000461190 712 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC083798.1-201ENST00000472671 131 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC015795.1-201ENST00000513669 327 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 COX6CP8-201ENST00000522620 226 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC099489.2-201ENST00000574976 260 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 LARP7P2-201ENST00000575306 125 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 VN1R80P-201ENST00000597126 338 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 YWHAQP7-201ENST00000603536 658 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 ARF4P1-201ENST00000605447 541 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 COX6CP4-201ENST00000605798 228 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AC114781.5-201ENST00000615297 108 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 AL160413.1-201ENST00000622780 310 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 DHX9P1-201ENST00000436565 3076 ntBASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM7Q9NR12 CKAP2P1-201ENST00000555477 2049 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms