Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL022161.1-201ENST00000604390 213 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC091946.2-201ENST00000606105 291 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC245297.2-201ENST00000610119 565 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC008121.2-201ENST00000614647 523 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AL136981.2-201ENST00000617319 734 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 AC120349.2-201ENST00000625002 298 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 XPOTP1-201ENST00000443317 2398 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 CYP1D1P-201ENST00000416662 1433 ntBASIC3.7□□□□□ -1.82
SIX2Q9NPC8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SIX2Q9NPC8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 Y_RNA.25-201ENST00000362528 102 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 RN7SKP224-201ENST00000364140 325 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 SNORA73.2-201ENST00000364946 201 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 RN7SKP285-201ENST00000410137 318 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 TIMM9P2-201ENST00000419324 266 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 RPL23AP82-202ENST00000427528 469 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 ISCA1P2-201ENST00000438679 421 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 MTND2P4-201ENST00000445034 1004 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 RPL7L1P1-201ENST00000448259 785 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 RPS27AP8-201ENST00000452665 445 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 HMGN3P1-201ENST00000453847 193 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 SYPL1P1-201ENST00000473622 768 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 MTND4LP31-201ENST00000514859 294 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 RNY4P37-201ENST00000516225 96 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AF186190.1-201ENST00000517470 480 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 TRMT10BP1-201ENST00000519377 943 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 ARL2BPP5-201ENST00000523141 481 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 SMARCE1P4-201ENST00000523647 241 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AP000790.1-201ENST00000528891 737 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC103843.2-201ENST00000530523 682 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 SLC2A13P1-201ENST00000531560 322 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC006130.2-201ENST00000586202 326 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 DUXAP11-201ENST00000603858 526 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC010738.1-201ENST00000604970 987 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC018714.1-201ENST00000605028 208 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC105129.3-201ENST00000605455 485 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC009704.2-201ENST00000618739 483 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC110801.1-201ENST00000623590 212 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC127502.3-201ENST00000636170 1206 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 AC087359.1-201ENST00000508335 1740 ntBASIC3.69□□□□□ -1.82
SIX2Q9NPC8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX2Q9NPC8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AL445523.1-201ENST00000451184 1362 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 RNU6-216P-201ENST00000363282 104 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 SNORA4.1-201ENST00000364263 144 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 RNU6-1293P-201ENST00000384077 107 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 MIR506-201ENST00000384998 124 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 SNORA68.2-201ENST00000391263 128 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 DSTNP4-201ENST00000399472 474 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 FABP12P1-201ENST00000401911 322 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AL450338.1-201ENST00000407987 512 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 RNA5SP31-201ENST00000411144 127 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 RPL36AP36-201ENST00000418616 301 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AL353597.2-202ENST00000434901 373 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 RN7SL542P-201ENST00000467147 294 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 RPL30P6-201ENST00000475925 342 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms