Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 VN1R105P-201ENST00000486595 910 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC068724.1-201ENST00000487100 792 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 RNU6-467P-201ENST00000517027 110 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC104417.1-201ENST00000523974 751 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC125611.1-201ENST00000549563 229 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AL845331.3-202ENST00000562856 261 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AP001521.1-201ENST00000609150 300 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AL445423.1-201ENST00000609941 536 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC005962.2-201ENST00000611427 652 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC010975.3-201ENST00000618727 978 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AP003122.6-201ENST00000623831 495 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AC090897.3-201ENST00000636973 1157 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 AL356274.2-201ENST00000624379 3752 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 GABRG2-229ENST00000641017 3628 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 SRP72P2-201ENST00000344851 1979 ntBASIC2.28□□□□□ -2.04
SND1-IT1Q9HBX3 TAB3P1-202ENST00000452645 1634 ntBASIC2.28□□□□□ -2.05
SND1-IT1Q9HBX3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 OR4G11P-202ENST00000642116 1414 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 MFSD8-233ENST00000641482 4860 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 SPRR2C-201ENST00000290702 219 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 RNU1-32P-201ENST00000363937 159 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 RNU6-707P-201ENST00000364647 95 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 MIR30B-201ENST00000384850 88 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 RNU6-882P-201ENST00000391025 103 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 RPL7P46-201ENST00000425129 740 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 BRWD1P3-201ENST00000428816 390 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 MTCO1P3-201ENST00000429327 192 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 TRIM60P18-201ENST00000441518 828 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 MTCYBP11-201ENST00000447254 1109 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC114755.5-201ENST00000447760 831 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AL133162.1-201ENST00000463228 453 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC092757.1-201ENST00000467293 467 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC092185.1-201ENST00000491371 97 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC010460.1-201ENST00000507087 466 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC111000.2-201ENST00000507775 550 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC010460.2-201ENST00000509054 677 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC008837.1-201ENST00000511513 412 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 RNA5SP217-201ENST00000515959 91 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 RNA5SP380-201ENST00000517190 98 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 RNU6-1261P-201ENST00000517194 104 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 FAM60DP-201ENST00000524174 632 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 CR383656.6-201ENST00000550518 394 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC053481.4-201ENST00000583164 216 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC245036.5-201ENST00000596330 847 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AL133393.1-201ENST00000603277 287 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC106900.2-201ENST00000604994 317 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC099785.1-201ENST00000605697 437 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 CYCSP41-201ENST00000616920 296 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC091046.2-201ENST00000620775 665 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AL354798.1-201ENST00000622505 329 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 MKKS-204ENST00000639674 192 ntBASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SND1-IT1Q9HBX3 Z99496.1-201ENST00000469424 1477 ntBASIC2.26□□□□□ -2.05
SND1-IT1Q9HBX3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SND1-IT1Q9HBX3 AL136520.1-201ENST00000600311 1322 ntBASIC2.26□□□□□ -2.05
SND1-IT1Q9HBX3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SND1-IT1Q9HBX3 ANKRD36P1-201ENST00000344424 659 ntBASIC2.26□□□□□ -2.05
SND1-IT1Q9HBX3 FRG1CP-201ENST00000358464 769 ntBASIC2.26□□□□□ -2.05
SND1-IT1Q9HBX3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SND1-IT1Q9HBX3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms