Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC016716.1-201ENST00000265882 708 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 Y_RNA.311-201ENST00000365068 96 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 RNU6-259P-201ENST00000383999 107 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 RNU6-253P-201ENST00000384730 105 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 RNU6ATAC-201ENST00000408749 126 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 MTCO1P17-201ENST00000411522 491 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 USP9YP6-201ENST00000413550 854 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 RAC1P3-201ENST00000416129 580 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC073069.1-201ENST00000428657 441 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AL445584.1-201ENST00000431451 330 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC091862.1-201ENST00000438016 1100 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 RPS4XP4-201ENST00000443195 763 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AP000542.1-201ENST00000448473 371 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 USP9YP34-201ENST00000453983 808 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 RPL23AP12-201ENST00000467573 473 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AL121769.1-201ENST00000469473 401 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC006499.5-201ENST00000505037 514 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC025554.1-201ENST00000505641 188 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC074344.1-201ENST00000512823 224 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 RN7SKP31-201ENST00000516354 278 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 RNA5SP143-201ENST00000516936 115 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC107016.1-201ENST00000550463 337 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 GTF2IP22-201ENST00000554443 182 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 ANP32BP3-201ENST00000559213 706 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AL360157.1-201ENST00000565962 87 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC090312.1-201ENST00000580637 348 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 MIR4444-1-201ENST00000581696 74 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 MIR4444-2-201ENST00000584390 74 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 MIR7844-201ENST00000616161 122 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC073348.1-201ENST00000623002 331 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC025048.6-202ENST00000627667 438 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 ATE1-AS1-202ENST00000636460 506 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 DBF4P1-201ENST00000412976 1892 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 AC027287.1-201ENST00000553115 1453 ntBASIC4.24□□□□□ -1.73
EBF3Q9H4W6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AL445437.1-201ENST00000623157 3087 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC007390.2-201ENST00000606229 3803 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 RNU2-6P-201ENST00000411404 190 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 RPS7P13-201ENST00000413955 498 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 MTATP6P27-201ENST00000416987 621 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AL109913.1-201ENST00000421173 514 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 RBMY1KP-201ENST00000423480 476 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AL050321.1-201ENST00000432363 400 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 PPIAP17-201ENST00000438507 471 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 CBX1P4-201ENST00000439415 457 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 COX6CP12-201ENST00000446748 202 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 ABCF2P2-201ENST00000450549 296 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AL354710.1-201ENST00000453641 246 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 RNA5SP269-201ENST00000459032 137 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC022034.3-201ENST00000471393 478 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC015724.1-201ENST00000478577 156 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 RPS4XP15-201ENST00000489210 795 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC116347.2-201ENST00000514912 523 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 COX6B1P6-201ENST00000522347 255 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms