Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC000403.1-201ENST00000613696 3585 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 SNORA7.2-201ENST00000364446 145 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 RNU6-1293P-201ENST00000384077 107 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 RNA5SP107-201ENST00000411358 122 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 RPS7P13-201ENST00000413955 498 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 RPS15AP6-201ENST00000420703 385 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AL139132.1-201ENST00000431587 344 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 HSFY7P-201ENST00000432672 318 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 HSFY8P-201ENST00000437934 318 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 HMGB1P12-201ENST00000438594 598 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC107083.1-201ENST00000439643 279 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AL662791.1-201ENST00000441992 928 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 RPL23AP33-201ENST00000442301 452 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 HSFY5P-201ENST00000453726 309 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC092754.2-201ENST00000463506 460 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC008565.1-201ENST00000509046 885 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC008885.2-201ENST00000509506 930 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC119751.5-201ENST00000514077 770 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 RN7SKP277-201ENST00000516895 283 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AL442163.2-201ENST00000553912 710 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 BNIP3P27-201ENST00000599991 412 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC078880.5-201ENST00000617845 421 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC018926.3-201ENST00000618841 406 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 RNU6-156P-201ENST00000621869 107 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AL391262.2-201ENST00000622466 494 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AL049777.1-201ENST00000622740 518 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC017104.5-201ENST00000637647 639 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 AC132825.7-201ENST00000638744 335 ntBASIC3.28□□□□□ -1.88
NXF3Q9H4D5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AL672296.1-201ENST00000427780 2158 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 RNU6-543P-201ENST00000362576 108 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 RNA5SP27-201ENST00000363839 119 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 RNU6-468P-201ENST00000384003 109 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 RNU6-1257P-201ENST00000384625 110 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 EI24P2-201ENST00000397776 1076 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC069282.1-201ENST00000411911 526 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC013262.1-201ENST00000426710 252 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC022018.1-201ENST00000430685 241 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 CKS1BP5-201ENST00000434172 273 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 SLC31A1P1-201ENST00000451221 567 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 BX276092.4-201ENST00000452056 248 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 RPS17P11-201ENST00000474297 293 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 NCOR1P1-202ENST00000486162 291 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 RN7SL20P-201ENST00000488827 297 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 HMGB3P15-201ENST00000507326 574 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 TMEM248P1-201ENST00000510579 951 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC068620.3-201ENST00000602749 560 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC073569.3-201ENST00000619055 682 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC092608.3-201ENST00000625017 386 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 AL365361.1-201ENST00000566942 3481 ntBASIC3.27□□□□□ -1.89
NXF3Q9H4D5 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NXF3Q9H4D5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 ENSAP3-201ENST00000312710 333 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 RNU6-1339P-201ENST00000363574 91 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 SNORA51.2-201ENST00000364595 132 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 RNU6-207P-201ENST00000384137 107 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AL355143.1-201ENST00000407101 841 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 MIR1250-201ENST00000408098 113 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AIMP1P1-201ENST00000418670 937 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC245291.1-201ENST00000419501 328 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 AC006960.1-201ENST00000419980 153 ntBASIC3.26□□□□□ -1.89
NXF3Q9H4D5 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.26□□□□□ -1.89
NXF3Q9H4D5 DEFB130D-201ENST00000426866 237 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms