Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CCDC58P3-201ENST00000590792 430 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC019159.1-201ENST00000605094 187 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC011890.2-201ENST00000613393 294 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC090116.1-201ENST00000615679 446 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC095031.1-201ENST00000623685 672 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AP003122.6-201ENST00000623831 495 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC068620.4-201ENST00000636730 1182 ntBASIC2.33□□□□□ -2.04
NKX6-2Q9C056 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NKX6-2Q9C056 SEC63P2-201ENST00000503863 1939 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC233263.6-201ENST00000631132 1963 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AL355596.1-201ENST00000565399 3996 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 RNU6-761P-201ENST00000384148 107 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 MIR218-2-201ENST00000385006 110 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 MTCO3P12-201ENST00000416718 547 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC079780.1-201ENST00000428259 207 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC073508.1-201ENST00000428866 656 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC020898.1-201ENST00000474167 787 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 OR5H5P-201ENST00000503164 928 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 RPL37P25-201ENST00000507308 276 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 RNA5SP367-201ENST00000516557 118 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 PAICSP4-201ENST00000517543 1253 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC022690.1-201ENST00000526681 550 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 CKS1BP1-201ENST00000555221 240 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC015871.2-201ENST00000603605 948 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC128687.1-201ENST00000605304 619 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 BX322635.1-201ENST00000605804 496 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC138932.5-201ENST00000617759 563 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 AC090897.3-201ENST00000636973 1157 ntBASIC2.32□□□□□ -2.04
NKX6-2Q9C056 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX6-2Q9C056 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 RNU6-1249P-201ENST00000363237 111 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 RNVU1-3-201ENST00000364313 161 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 SNORD51.1-201ENST00000365405 77 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 ANAPC10P1-201ENST00000395991 556 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AL512633.1-201ENST00000399931 655 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 FABP12P1-201ENST00000401911 322 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 FO393413.1-201ENST00000402892 195 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 UBE2V1P9-201ENST00000414760 368 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 FNDC3CP-201ENST00000420795 1155 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 UBE2D3P2-201ENST00000424409 445 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 CABYRP1-201ENST00000465493 1045 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC104619.4-201ENST00000510773 249 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 FAM60DP-201ENST00000524174 632 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.31□□□□□ -2.04
NKX6-2Q9C056 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.31□□□□□ -2.04
NKX6-2Q9C056 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms