Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 OR1AB1P-201ENST00000585564 761 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC006130.2-201ENST00000586202 326 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC016877.3-201ENST00000606778 504 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC103858.2-201ENST00000621471 543 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AL049777.1-201ENST00000622740 518 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 RNU1-101P-201ENST00000391171 127 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 AC025750.1-201ENST00000399891 379 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 AC092647.1-201ENST00000420654 287 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 AC079780.1-201ENST00000428259 207 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 RNA5SP310-201ENST00000459084 116 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 AC104164.3-201ENST00000467363 1258 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 RPL7P23-201ENST00000493874 747 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 RNU6-276P-201ENST00000516114 96 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 OR5AK1P-201ENST00000524837 922 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 OR10V3P-201ENST00000525712 725 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 AC005832.3-201ENST00000537929 631 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 BNIP3P11-201ENST00000603878 563 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 AL109618.2-201ENST00000605527 211 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 AC012603.1-201ENST00000606424 528 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 DUXAP10-204ENST00000612052 616 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 MAPK10-253ENST00000641010 4072 ntBASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4AQ9BY43 AC008568.2-201ENST00000623862 2313 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC087359.1-201ENST00000508335 1740 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 SKINT1L-201ENST00000401057 817 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AL450338.1-201ENST00000407987 512 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 CYCSP19-201ENST00000411715 316 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 UBE2D3P2-201ENST00000424409 445 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AL590233.1-201ENST00000430017 456 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 SDCBPP1-201ENST00000440192 890 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AL133162.1-201ENST00000463228 453 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC006483.1-201ENST00000487308 313 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC024224.1-201ENST00000538284 609 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC107016.1-201ENST00000550463 337 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 YWHAZP1-201ENST00000556286 722 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC020914.4-201ENST00000597690 277 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 PART1_2.1-201ENST00000612397 250 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AC022509.4-201ENST00000621404 572 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 AL390862.1-201ENST00000635467 1469 ntBASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
CHMP4AQ9BY43 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 ZNF826P-207ENST00000622273 1910 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 RNU5E-10P-201ENST00000363506 118 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 HLFP1-201ENST00000402375 499 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AC234781.2-201ENST00000426370 994 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AC111000.2-201ENST00000507775 550 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 HMGB1P28-201ENST00000507778 552 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AC026726.1-201ENST00000512859 601 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AC011260.1-201ENST00000578420 472 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AL138478.1-201ENST00000612252 832 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 MIR6130-201ENST00000619419 109 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AC233309.1-201ENST00000619522 751 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms