Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 MIR208A-201ENST00000362287 71 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 Y_RNA.183-201ENST00000363882 113 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 Y_RNA.199-201ENST00000364014 102 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 RNY3P11-201ENST00000364153 102 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 RNU6-1078P-201ENST00000364522 103 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 SNORA22C-201ENST00000384614 134 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 RPL23AP69-201ENST00000431134 458 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 RPL21P112-201ENST00000434403 463 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AL590399.4-201ENST00000436561 601 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 RPL17P19-201ENST00000489069 552 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AL035690.1-201ENST00000490892 383 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 RPS26P24-201ENST00000497656 331 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 SNORA58-201ENST00000505219 137 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC104806.1-201ENST00000508720 308 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC139365.2-201ENST00000517972 253 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 VN1R91P-201ENST00000594377 169 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 VN1R85P-201ENST00000601587 426 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 MIR7973-1-201ENST00000614683 76 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC131009.3-201ENST00000621809 287 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC055839.1-201ENST00000634467 498 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC011460.1-201ENST00000636268 1834 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 MFSD8-217ENST00000641178 4374 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC092070.2-203ENST00000598377 3644 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AC138915.4-201ENST00000565549 4147 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 RN7SKP145-201ENST00000363291 303 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 RNU6-61P-201ENST00000365528 109 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 MIR670-201ENST00000390142 98 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AL034374.1-201ENST00000406329 351 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 Y_RNA.629-201ENST00000411368 105 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AC096920.1-201ENST00000423991 241 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AC093655.2-201ENST00000425735 631 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AC073069.1-201ENST00000428657 441 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 FTH1P1-201ENST00000437933 532 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 RPL21P89-201ENST00000444021 467 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AL031659.1-201ENST00000447075 539 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 OR2AQ1P-201ENST00000451972 200 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 NIP7P2-201ENST00000485801 544 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 SNORA14.1-201ENST00000516113 141 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 RNU2-10P-201ENST00000516375 211 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 MTND5P41-201ENST00000517498 206 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AC021006.3-201ENST00000530771 192 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AC024405.2-202ENST00000532731 184 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AL390123.1-201ENST00000603216 237 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AL391358.1-201ENST00000605342 190 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AL356274.1-201ENST00000617064 410 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 AP000843.1-201ENST00000624880 701 ntBASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms