Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AP001636.2-201ENST00000525517 696 ntBASIC4.14□□□□□ -1.75
SLF1Q9BQI6 AC109635.4-202ENST00000531666 412 ntBASIC4.14□□□□□ -1.75
SLF1Q9BQI6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.14□□□□□ -1.75
SLF1Q9BQI6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.14□□□□□ -1.75
SLF1Q9BQI6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.14□□□□□ -1.75
SLF1Q9BQI6 AC144521.1-201ENST00000607148 956 ntBASIC4.14□□□□□ -1.75
SLF1Q9BQI6 AC022509.4-201ENST00000621404 572 ntBASIC4.14□□□□□ -1.75
SLF1Q9BQI6 AC120349.2-201ENST00000625002 298 ntBASIC4.14□□□□□ -1.75
SLF1Q9BQI6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.14□□□□□ -1.75
SLF1Q9BQI6 OR6C71P-202ENST00000641886 1107 ntBASIC4.14□□□□□ -1.75
SLF1Q9BQI6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLF1Q9BQI6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SLF1Q9BQI6 AC109315.1-201ENST00000584143 1347 ntBASIC4.14□□□□□ -1.75
SLF1Q9BQI6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC004925.1-201ENST00000624256 2706 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 NACA3P-201ENST00000359690 648 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 U3.29-201ENST00000391296 212 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AL136310.1-201ENST00000404926 654 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 HSPE1P26-201ENST00000405341 275 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 MTCO3P12-201ENST00000416718 547 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 TOMM22P1-201ENST00000418578 312 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 RPS3AP37-201ENST00000419176 745 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AL158156.1-201ENST00000422509 473 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 EEF1A1P39-201ENST00000440791 250 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC007327.1-201ENST00000447461 264 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AL589880.1-201ENST00000448271 287 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 RPL9P32-201ENST00000464118 620 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 RPS4XP10-201ENST00000465034 731 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 UBE2V1P12-201ENST00000503954 474 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 HMGB1P22-201ENST00000505315 124 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 SNORA70.24-201ENST00000517233 118 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AL031985.2-201ENST00000600955 480 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AL160237.3-201ENST00000604114 1013 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC006077.1-201ENST00000604746 343 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AP003355.3-201ENST00000623465 114 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC040168.1-201ENST00000623594 991 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 AC244517.1-201ENST00000606030 2086 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 GABPAP-201ENST00000419271 1356 ntBASIC4.13□□□□□ -1.75
SLF1Q9BQI6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLF1Q9BQI6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 RNU4-35P-201ENST00000362588 141 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 RNU1-33P-201ENST00000364249 162 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 RNA5SP235-201ENST00000365411 114 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 MIR491-201ENST00000384877 84 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 AL391417.1-201ENST00000404100 426 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 AC106883.1-201ENST00000418805 562 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 RPL23AP74-201ENST00000437246 471 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 MTCO2P25-201ENST00000447065 681 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 RPL26P28-201ENST00000451325 435 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 RPS24P6-201ENST00000452670 400 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 snoU109.4-201ENST00000458953 143 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 AC011979.1-201ENST00000472300 483 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 AC025518.1-201ENST00000479856 347 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 SETP14-201ENST00000497538 873 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 RN7SKP31-201ENST00000516354 278 ntBASIC4.12□□□□□ -1.75
SLF1Q9BQI6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.12□□□□□ -1.75
SLF1Q9BQI6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms