Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 AC027228.2-201ENST00000567141 2154 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 DNM1P47-203ENST00000571780 12667 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 RNA5SP321-201ENST00000362722 111 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 SNORD113-8-201ENST00000363497 74 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 RNA5SP512-201ENST00000364550 120 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 Y_RNA.358-201ENST00000365491 99 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 MIR135A2-201ENST00000384854 100 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 RPL21P75-201ENST00000396599 483 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 RPL21P28-201ENST00000401418 483 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 RNU2-51P-201ENST00000410708 197 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 AL590556.1-201ENST00000423231 483 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 MRPS21P2-201ENST00000424704 264 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 BX679664.1-201ENST00000434429 253 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 CRYGGP-201ENST00000443337 145 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 RPS11P1-201ENST00000451072 473 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 AKR1D1P1-201ENST00000457236 936 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 RPL21P11-201ENST00000461458 483 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 RPL21P39-201ENST00000463605 483 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 COX6CP14-201ENST00000469580 174 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 RPL7AP23-201ENST00000482625 776 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 AC132942.1-201ENST00000486753 483 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 AC093591.1-201ENST00000491435 481 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 RPL21P16-201ENST00000495531 483 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 MRPS33P2-201ENST00000507850 322 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 HIGD1AP3-201ENST00000515857 278 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 BDH2P1-201ENST00000602288 736 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 AL450472.3-201ENST00000615578 367 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 AC125336.1-201ENST00000508893 2827 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 AC024651.2-201ENST00000562480 2098 ntBASIC5.94□□□□□ -1.46
USB1Q9BQ65 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
USB1Q9BQ65 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 MAPK10-338ENST00000641647 3362 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 Z97989.1-201ENST00000531702 2421 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 MIR190B-201ENST00000401119 79 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 RN7SKP51-201ENST00000410781 304 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AL645939.3-201ENST00000435408 225 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AL121578.2-201ENST00000448797 447 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 U8.21-201ENST00000459536 136 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 MTND5P41-201ENST00000517498 206 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AP006587.5-201ENST00000532033 739 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 AL590705.4-201ENST00000532209 134 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 AL591767.3-201ENST00000554632 525 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 MIR6849-201ENST00000618543 69 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 MIR6813-201ENST00000621638 56 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms