Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PRPF19P1-201ENST00000584766 898 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AP001330.4-201ENST00000604350 154 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AC016925.2-201ENST00000605108 242 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 OR2L1P-202ENST00000641567 1023 ntBASIC5.72□□□□□ -1.49
SYNGAP1Q96PV0 AL122126.1-201ENST00000546905 1318 ntBASIC5.71□□□□□ -1.49
SYNGAP1Q96PV0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SYNGAP1Q96PV0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.71□□□□□ -1.49
SYNGAP1Q96PV0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC073343.1-201ENST00000328239 651 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 RNA5SP171-201ENST00000391071 115 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC016769.3-201ENST00000396562 315 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AL583835.1-201ENST00000399570 407 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 Y_RNA.615-201ENST00000410769 117 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AF186996.5-201ENST00000418098 904 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AL451054.2-201ENST00000420896 202 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 REREP1Y-201ENST00000422655 198 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC018630.2-202ENST00000422992 927 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 MTCO3P21-201ENST00000430791 643 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AL359265.2-201ENST00000434367 631 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 PPIAP13-201ENST00000434706 478 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 YWHAZP8-201ENST00000436935 731 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 REREP2Y-201ENST00000439103 200 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 HSPE1P28-201ENST00000443139 211 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 TCEA1P1-201ENST00000449716 880 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 Y_RNA.631-201ENST00000459607 101 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-329P-201ENST00000459618 107 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC011005.3-201ENST00000491624 395 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-559P-201ENST00000516151 98 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 ELOCP31-201ENST00000540463 467 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC040958.1-201ENST00000561102 201 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AL356432.3-201ENST00000568952 465 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC080078.3-201ENST00000605407 463 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC022106.2-201ENST00000620114 757 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 MTND4LP32-201ENST00000636111 270 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC092447.10-201ENST00000620607 1652 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC006020.1-201ENST00000420179 1854 ntBASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNGAP1Q96PV0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC097504.1-201ENST00000515103 2415 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 Y_RNA.145-201ENST00000363527 102 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 Y_RNA.445-201ENST00000384168 102 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 GLULP6-201ENST00000399502 913 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AL356421.1-201ENST00000403255 413 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 PRRC2CP1-201ENST00000404428 159 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AL078604.1-201ENST00000404609 466 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 SNORA77-201ENST00000408716 125 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 RNU2-62P-201ENST00000410868 191 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 BEND7P1-201ENST00000422058 457 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 HMGN2P27-201ENST00000427352 270 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC009238.2-201ENST00000431026 355 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AL359073.1-201ENST00000448036 403 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 ENPP7P11-201ENST00000505915 627 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC105417.1-201ENST00000514691 285 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 RN7SKP96-201ENST00000516948 297 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 SOD1P3-201ENST00000518682 454 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC009643.1-201ENST00000532030 391 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms