Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL590282.1-201ENST00000610379 1136 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 AL163051.2-201ENST00000618976 735 ntBASIC3.13□□□□□ -1.91
C9orf72Q96LT7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
C9orf72Q96LT7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 GSTA8P-201ENST00000404253 637 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 RNA5SP129-201ENST00000410276 118 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 RNA5SP274-201ENST00000410484 108 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 RN7SKP58-201ENST00000411010 305 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 UBE2V1P9-201ENST00000414760 368 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 HSFY1P1-201ENST00000423928 1178 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AC127537.2-201ENST00000439258 465 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 HSPE1P28-201ENST00000443139 211 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 RPL7P59-201ENST00000447700 943 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 BX248409.1-201ENST00000455497 255 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 NECAP1P2-201ENST00000455668 727 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 RN7SL863P-201ENST00000462370 296 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AL136126.1-201ENST00000473603 402 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 RN7SL633P-201ENST00000488974 297 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 HMGB1P22-201ENST00000505315 124 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 POU5F1P7-201ENST00000508759 541 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AC104057.1-201ENST00000515547 497 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AC040174.2-201ENST00000602701 465 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AL109653.1-201ENST00000603091 248 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AC124312.4-201ENST00000605533 310 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AC105227.2-201ENST00000615075 605 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AC026422.1-201ENST00000623961 452 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AC020923.1-201ENST00000624021 917 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 ZNF734P-201ENST00000419494 1534 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AL355578.1-201ENST00000607405 1328 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 AC004925.1-201ENST00000624256 2706 ntBASIC3.12□□□□□ -1.91
C9orf72Q96LT7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf72Q96LT7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 RNU6-444P-201ENST00000383988 108 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 SNORD67-201ENST00000390833 111 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 RNU6-837P-201ENST00000391056 108 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 RPL31P1-201ENST00000398116 372 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 SFR1P1-201ENST00000403720 688 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 RPS3AP9-201ENST00000417027 792 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 OFD1P18Y-201ENST00000420889 959 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 RPL7P46-201ENST00000425129 740 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC011242.1-201ENST00000433596 1158 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 RPS7P2-201ENST00000435134 607 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 HMGB1P15-201ENST00000453854 435 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 snoU13.3-201ENST00000459441 104 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 RPL21P8-201ENST00000465083 535 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 RPL27AP5-201ENST00000469428 449 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC108860.1-201ENST00000484521 383 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 MTCO3P35-201ENST00000485582 781 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC006445.1-201ENST00000491925 405 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 GMPSP1-201ENST00000514075 579 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC083760.1-201ENST00000589621 670 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 VN1R92P-201ENST00000598511 928 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC096586.1-201ENST00000610267 561 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 AC138932.5-201ENST00000617759 563 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.11□□□□□ -1.91
C9orf72Q96LT7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.11□□□□□ -1.91
C9orf72Q96LT7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AC002546.1-201ENST00000588041 2504 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 GNG5P1-201ENST00000255500 204 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms