Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 RNA5SP28-201ENST00000363841 119 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 RNU1-130P-201ENST00000363930 160 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 MIR708-201ENST00000390708 88 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 SNRPEP2-201ENST00000397592 279 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 RN7SKP58-201ENST00000411010 305 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC009310.1-201ENST00000414414 451 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 FCF1P2-201ENST00000415284 583 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 HMGB3P20-201ENST00000417997 600 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 TMBIM7P-201ENST00000418074 855 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 USP9YP36-201ENST00000424581 829 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 RPS29P17-201ENST00000430795 166 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 ACTR3P2-201ENST00000439585 1257 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 RPL7P48-201ENST00000461513 746 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 RPL23AP37-201ENST00000479658 549 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 SNORA18.6-201ENST00000516792 115 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AL355375.2-201ENST00000574825 175 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC007363.1-201ENST00000604736 620 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC243654.2-201ENST00000612843 443 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC007342.8-201ENST00000623278 678 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AP000843.1-201ENST00000624880 701 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 OR2L1P-202ENST00000641567 1023 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHFRQ96EP1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.7□□□□□ -1.66
CHFRQ96EP1 DCAF13P3-201ENST00000561147 1334 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC007823.1-201ENST00000569932 1566 ntBASIC4.7□□□□□ -1.66
CHFRQ96EP1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHFRQ96EP1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC138915.3-201ENST00000562908 1389 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHFRQ96EP1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHFRQ96EP1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 Y_RNA.67-201ENST00000362870 100 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 RNU6-767P-201ENST00000384132 107 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 RNU6-463P-201ENST00000384340 107 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 RPS3AP36-201ENST00000398190 775 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 U3.35-201ENST00000408405 208 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 E2F6P2-201ENST00000420708 748 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 AL356583.2-201ENST00000426536 280 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AL358934.1-201ENST00000432346 324 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 HMGB1P45-201ENST00000435986 653 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 UBE2FP3-201ENST00000436366 524 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC002542.1-201ENST00000440683 193 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC097499.1-201ENST00000444277 208 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 FGF7P3-201ENST00000454645 303 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 RN7SL303P-201ENST00000469773 251 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC012170.1-201ENST00000495139 359 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC025164.1-201ENST00000496249 478 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 HMGB1P29-201ENST00000505659 499 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 Y_RNA.693-201ENST00000516641 110 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 AL512360.1-201ENST00000555346 234 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms