Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 NANOGP6-201ENST00000429190 847 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AL596276.1-201ENST00000434465 418 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AL353748.1-201ENST00000440753 474 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AL353572.1-201ENST00000442490 417 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 GAPDHP17-201ENST00000449858 1001 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC005297.2-201ENST00000450430 606 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC099563.1-201ENST00000456086 418 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 RPS29P19-201ENST00000479709 171 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AP001025.2-201ENST00000490908 477 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 RPL23AP72-201ENST00000492447 435 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 RNF138P1-201ENST00000502765 546 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 MYL12AP1-201ENST00000518490 515 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC092325.1-201ENST00000566449 554 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 MIR3682-201ENST00000581338 84 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AL353997.4-201ENST00000586196 166 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 LINC00901.1-201ENST00000617252 152 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AC136475.10-201ENST00000620253 385 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AL157786.1-207ENST00000627771 695 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 AL592182.3-201ENST00000642132 3304 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.37□□□□□ -1.71
ATG4AQ8WYN0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL451142.2-201ENST00000429076 2090 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC079741.1-201ENST00000321498 212 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 RNA5SP505-201ENST00000364748 108 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 RNU6-178P-201ENST00000384631 104 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 Y_RNA.554-201ENST00000384672 102 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 MIR129-1-201ENST00000384972 72 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL121834.1-202ENST00000404494 277 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 MIR1179-201ENST00000408703 91 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 RNA5SP104-201ENST00000410989 118 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 SPA17P1-201ENST00000416656 452 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC004552.1-201ENST00000419089 348 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL356387.2-201ENST00000422272 243 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL157831.1-201ENST00000426134 473 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC009961.2-201ENST00000435771 251 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 RPL22P17-201ENST00000438729 315 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 PHBP16-201ENST00000446318 950 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 EIF4A1P11-201ENST00000451239 222 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL513533.1-201ENST00000453728 415 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 PLGLA-201ENST00000465668 449 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 RPS26P3-201ENST00000470205 348 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC090543.2-201ENST00000483963 348 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC004057.1-201ENST00000485827 348 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC034222.1-201ENST00000494052 532 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC093767.1-201ENST00000504523 156 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC111000.3-201ENST00000508057 576 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC108078.1-201ENST00000508073 725 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 RNU6-718P-201ENST00000516166 105 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AP003122.4-201ENST00000530980 758 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 TRAV8-5-201ENST00000537369 341 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 MIR4716-201ENST00000579628 84 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms