Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 SNORA31.9-201ENST00000516429 84 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 CDH12P4-201ENST00000517835 295 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 CDH12P3-201ENST00000517935 295 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 CDH12P1-201ENST00000518435 295 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 AC034205.1-201ENST00000520621 638 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 RNU4-89P-201ENST00000607443 133 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 AL157392.4-201ENST00000609756 345 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 HSPA8P1-201ENST00000425843 1833 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 MTND5P24-201ENST00000438892 1767 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC89Q8N998 RPS4XP5-202ENST00000449995 1334 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AL022578.1-201ENST00000439330 1433 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC89Q8N998 CR381670.1-201ENST00000624291 1693 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 RNA5SP443-201ENST00000363083 132 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 RNA5SP130-201ENST00000364431 114 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 RNU6-621P-201ENST00000364752 109 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 SNORA1.3-201ENST00000384676 136 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 RPS4XP3-201ENST00000398541 413 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 USP9YP36-201ENST00000424581 829 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 SKP1P1-201ENST00000438081 489 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 SDR42E1P3-201ENST00000438345 502 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 MTCO3P16-201ENST00000454456 754 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 snoU13.8-201ENST00000458890 104 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AC084198.1-201ENST00000477747 402 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC89Q8N998 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 AL359273.1-201ENST00000510918 627 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 SNORA31.1-201ENST00000515993 133 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 SNORA31.5-201ENST00000516190 133 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 RN7SKP83-201ENST00000516512 178 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 MRPL49P2-201ENST00000521066 465 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC89Q8N998 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC89Q8N998 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 YPEL5P3-201ENST00000547227 352 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 MIR3921-201ENST00000577308 85 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AC011451.2-201ENST00000604303 598 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AL137849.1-201ENST00000604767 169 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 SNORA51-201ENST00000606420 132 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AC092354.2-201ENST00000607786 514 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AL445264.1-201ENST00000621719 171 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 AC090897.3-201ENST00000636973 1157 ntBASIC3.98□□□□□ -1.77
CCDC89Q8N998 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCDC89Q8N998 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC89Q8N998 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC89Q8N998 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC89Q8N998 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC89Q8N998 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 RNU1-32P-201ENST00000363937 159 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 RNU6-952P-201ENST00000391164 108 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 RNU1-101P-201ENST00000391171 127 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 Z98941.1-201ENST00000407764 100 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 Z97055.1-201ENST00000419730 712 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 TBCAP1-201ENST00000436520 327 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 AC104308.1-201ENST00000454621 333 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 RPL31P50-201ENST00000471002 296 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 RPL30P14-201ENST00000482744 348 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 AC017037.2-201ENST00000513850 890 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 AC093677.1-201ENST00000514414 678 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 DEFB131D-201ENST00000526803 184 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC89Q8N998 MIR3939-201ENST00000582614 106 ntBASIC3.97□□□□□ -1.77
CCDC89Q8N998 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms