Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
NPAS3Q8IXF0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 IMMTP1-201ENST00000435590 2219 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 Y_RNA.16-201ENST00000362421 102 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 Y_RNA.183-201ENST00000363882 113 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 SNORA62.2-201ENST00000364672 152 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 Y_RNA.497-201ENST00000384447 98 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AL136131.1-201ENST00000406079 803 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 Y_RNA.597-201ENST00000410463 100 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 RN7SKP235-201ENST00000410662 305 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 RNU6-130P-201ENST00000411112 103 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 BX682237.1-201ENST00000415016 335 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 OR7E116P-201ENST00000448529 957 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AP001992.1-205ENST00000462248 379 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 RN7SL570P-201ENST00000484405 292 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 RN7SL30P-201ENST00000488416 306 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 RPL17P19-201ENST00000489069 552 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 COX6B1P2-201ENST00000489624 230 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AP002812.1-201ENST00000495378 474 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 RNU2-31P-201ENST00000516954 155 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AP006245.2-201ENST00000522004 300 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 FAM106CP-201ENST00000582212 507 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 MIR132-201ENST00000591554 101 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 VN1R91P-201ENST00000594377 169 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 MIR6837-201ENST00000620884 64 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AP004289.1-201ENST00000436307 2205 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 OR4G2P-202ENST00000641004 1759 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 AC093311.1-201ENST00000506586 2021 ntBASIC5.98□□□□□ -1.45
NPAS3Q8IXF0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 AC034229.2-201ENST00000566945 2508 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 snoU2_19.2-201ENST00000363024 80 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 SNORD115-7-201ENST00000365306 82 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 RNU6-128P-201ENST00000383976 107 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 RNU6-611P-201ENST00000384276 104 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 BX842559.1-201ENST00000419615 532 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 AL445305.1-201ENST00000432577 575 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 DYNLL1P5-201ENST00000467158 270 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 RPL7P23-201ENST00000493874 747 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 AC008953.1-201ENST00000497334 318 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 MIR2117-201ENST00000516780 80 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 AC007991.1-201ENST00000522680 631 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 AC093023.1-201ENST00000547375 507 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 AC096996.1-201ENST00000563813 325 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 AC103710.2-201ENST00000609912 942 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 AC015712.7-201ENST00000615211 635 ntBASIC5.97□□□□□ -1.45
NPAS3Q8IXF0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms