Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 MIR423-201ENST00000362201 94 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 MIR199A2-201ENST00000385289 110 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 DHFRP6-201ENST00000401776 268 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AL138878.1-201ENST00000405131 347 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AL137014.1-201ENST00000420490 1226 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC099677.1-201ENST00000420575 175 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AL358232.1-201ENST00000448030 501 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC034236.1-201ENST00000469891 373 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 ACTR3P3-201ENST00000480448 893 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC108729.1-201ENST00000487812 947 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC093853.1-201ENST00000515689 483 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC099489.2-201ENST00000574976 260 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AL031176.1-201ENST00000604554 466 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 AC097478.2-201ENST00000610572 514 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.93□□□□□ -1.78
PRPF39Q86UA1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF39Q86UA1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 MIR1284-201ENST00000408337 120 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AL592310.1-201ENST00000414330 671 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AL365396.1-201ENST00000430854 671 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AL662791.1-201ENST00000441992 928 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 SNRPGP3-201ENST00000469405 227 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 TRBV12-2-201ENST00000489763 344 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 KLHL2P1-201ENST00000508691 521 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AC021146.1-201ENST00000511202 716 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 NDUFB4P9-201ENST00000511646 388 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AC010587.2-201ENST00000511727 448 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 FABP5P12-201ENST00000515543 389 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 RNU6-352P-201ENST00000516908 107 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 OR5AK1P-201ENST00000524837 922 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AC010198.2-201ENST00000550612 259 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 ZNF192P1-203ENST00000565888 810 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AC012531.5-201ENST00000611375 151 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AL590240.3-201ENST00000621416 943 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 AC244205.2-202ENST00000635781 342 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.92□□□□□ -1.78
PRPF39Q86UA1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF39Q86UA1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 MIR449B-201ENST00000384995 97 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 HLFP1-201ENST00000402375 499 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 RHEBP3-201ENST00000411920 351 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC127526.1-201ENST00000417526 366 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 RPL21P109-201ENST00000422213 475 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC079780.1-201ENST00000428259 207 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms