Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 AC068790.3-201ENST00000602988 553 ntBASIC4.97□□□□□ -1.61
ATG4DQ86TL0 AL713866.2-201ENST00000603579 219 ntBASIC4.97□□□□□ -1.61
ATG4DQ86TL0 AL008729.2-201ENST00000606393 473 ntBASIC4.97□□□□□ -1.61
ATG4DQ86TL0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 uc_338.12-201ENST00000616344 181 ntBASIC4.97□□□□□ -1.61
ATG4DQ86TL0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 AC093671.1-201ENST00000624981 2929 ntBASIC4.97□□□□□ -1.61
ATG4DQ86TL0 AC010266.2-201ENST00000564741 3255 ntBASIC4.97□□□□□ -1.61
ATG4DQ86TL0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG4DQ86TL0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
ATG4DQ86TL0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
ATG4DQ86TL0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.96□□□□□ -1.61
ATG4DQ86TL0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 ADAM24P-201ENST00000398655 2101 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 TCP11X1-202ENST00000622971 1372 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 SNORD3E-201ENST00000362899 217 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 RNU6-490P-201ENST00000362985 107 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 RN7SKP160-201ENST00000363804 340 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 Y_RNA.222-201ENST00000364264 102 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 RNA5SP132-201ENST00000364725 118 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 Y_RNA.428-201ENST00000384078 102 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 RNU6-713P-201ENST00000384761 107 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AL360182.1-201ENST00000397433 468 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 SNORA11B-201ENST00000408175 129 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 CBX1P3-201ENST00000413296 527 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 MTCO3P19-201ENST00000415864 321 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 ATG3P1-201ENST00000419507 911 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 RPS15AP10-201ENST00000432472 382 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 TIMM9P1-201ENST00000436122 256 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC093156.1-201ENST00000440382 670 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC114495.1-201ENST00000441274 436 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AL590664.1-201ENST00000448065 339 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC098583.1-201ENST00000480875 255 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 RPL23AP72-201ENST00000492447 435 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC008526.1-201ENST00000509149 338 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC025465.3-201ENST00000510570 311 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 Y_RNA.670-201ENST00000516255 105 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 SCARNA20.4-201ENST00000516969 131 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AC017100.2-201ENST00000584628 355 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AL353997.4-201ENST00000586196 166 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AP000769.2-201ENST00000602344 396 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AL355297.3-201ENST00000604082 446 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AL691477.1-201ENST00000624398 162 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AL159972.1-201ENST00000625150 448 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 MAPK10-338ENST00000641647 3362 ntBASIC4.96□□□□□ -1.62
ATG4DQ86TL0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG4DQ86TL0 AL360270.2-201ENST00000562952 5985 ntBASIC4.95□□□□□ -1.62
ATG4DQ86TL0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
ATG4DQ86TL0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4DQ86TL0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4DQ86TL0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG4DQ86TL0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4DQ86TL0 AC093849.1-201ENST00000563631 2209 ntBASIC4.95□□□□□ -1.62
ATG4DQ86TL0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG4DQ86TL0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4DQ86TL0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATG4DQ86TL0 AL161781.1-201ENST00000354277 403 ntBASIC4.95□□□□□ -1.62
ATG4DQ86TL0 RN7SKP124-201ENST00000364730 341 ntBASIC4.95□□□□□ -1.62
ATG4DQ86TL0 RNU1-115P-201ENST00000365329 160 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms