Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PTENP1-201ENST00000447117 1215 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC114755.5-201ENST00000447760 831 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC140076.1-201ENST00000449897 361 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 UBE2V1P12-201ENST00000503954 474 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC006499.2-201ENST00000513470 337 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 SNORD59.2-201ENST00000516873 68 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 OR6C7P-201ENST00000547875 934 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC005951.1-201ENST00000576706 485 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 MIR3160-1-201ENST00000577972 85 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC093227.2-201ENST00000589357 285 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC009220.3-201ENST00000604318 586 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC107075.1-201ENST00000613695 314 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 MIR6891-201ENST00000618788 93 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AL596245.1-201ENST00000618994 362 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC140479.6-201ENST00000633535 357 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AL773545.4-201ENST00000637262 310 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AL513478.4-201ENST00000641636 310 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC005539.1-201ENST00000443768 1479 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 AC110774.1-201ENST00000623567 2018 ntBASIC3.53□□□□□ -1.84
C11orf88Q6PI97 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 ZNF826P-207ENST00000622273 1910 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 ZNF542P-204ENST00000482727 1305 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 IPO8P1-201ENST00000455509 3109 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 RPL23AP29-201ENST00000397284 453 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 RNU6-1077P-201ENST00000410506 102 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC233728.2-201ENST00000425348 757 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 TRIAP1P1-201ENST00000427062 225 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 USP9YP11-201ENST00000427537 717 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 RPL21P40-201ENST00000428586 483 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC011742.1-201ENST00000431448 434 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 OR4K11P-201ENST00000431829 904 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 USP9YP24-201ENST00000434374 697 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 RPL23AP46-201ENST00000438548 490 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 USP9YP17-201ENST00000444617 696 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC002381.1-201ENST00000447049 280 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 ARPC3P5-201ENST00000448802 534 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 RPL36AP33-201ENST00000450395 310 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 RPL21P134-201ENST00000453468 483 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 DHFRP3-201ENST00000455595 559 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 RPL36AP13-201ENST00000457490 317 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 RPL21P8-201ENST00000465083 535 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AL049714.1-201ENST00000466686 347 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 RPL7P9-201ENST00000468715 747 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AL359273.1-201ENST00000510918 627 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC079395.1-201ENST00000510981 262 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 RN7SKP21-201ENST00000516503 220 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 MRPL49P2-201ENST00000521066 465 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 MTCO1P49-201ENST00000523429 802 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC125611.2-201ENST00000551907 647 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC007224.1-201ENST00000564410 144 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC012417.1-201ENST00000582307 1039 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC022916.3-201ENST00000592961 742 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC113403.1-201ENST00000604910 193 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 MIR6076-201ENST00000617521 113 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC011330.2-201ENST00000621680 635 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC090772.4-201ENST00000623599 362 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 MIR3653-201ENST00000625572 110 ntBASIC3.52□□□□□ -1.85
C11orf88Q6PI97 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
C11orf88Q6PI97 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.51□□□□□ -1.85
C11orf88Q6PI97 AC009812.4-201ENST00000569134 1805 ntBASIC3.51□□□□□ -1.85
C11orf88Q6PI97 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
C11orf88Q6PI97 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms