Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RAC1P7-201ENST00000445367 377 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC108059.3-201ENST00000456388 214 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 RPL21P6-201ENST00000479171 504 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 PPIAP19-201ENST00000486414 492 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AF213884.1-201ENST00000488102 463 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 RNU7-51P-201ENST00000516560 62 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC022404.1-201ENST00000555320 273 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC138761.3-201ENST00000579993 334 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC006363.1-201ENST00000603806 463 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 RNA5SP440-201ENST00000612665 119 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AP000843.1-201ENST00000624880 701 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF20Q5VTR2 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.43□□□□□ -1.38
RNF20Q5VTR2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 SNORA16A-201ENST00000384342 137 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AL139397.2-201ENST00000404529 772 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 OR2AS1P-201ENST00000427827 319 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC096644.2-201ENST00000429278 159 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AF228730.2-201ENST00000438784 848 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 RPL23AP43-201ENST00000446445 471 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 GAPDHP25-201ENST00000447061 1001 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC104073.1-201ENST00000451988 151 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC016724.1-201ENST00000453215 421 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC087879.1-201ENST00000474343 374 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC068305.1-201ENST00000497406 726 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC002456.2-201ENST00000509356 380 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC016559.2-201ENST00000510759 359 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 MYL12BP1-201ENST00000569826 507 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 RN7SL290P-201ENST00000578661 300 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC011155.2-201ENST00000623202 216 ntBASIC6.42□□□□□ -1.38
RNF20Q5VTR2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF20Q5VTR2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 CDC27P3-201ENST00000635418 1910 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RNF20Q5VTR2 RNU6-1115P-201ENST00000362490 106 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 Y_RNA.135-201ENST00000363439 95 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 RN7SKP153-201ENST00000365026 316 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 RNU6-1040P-201ENST00000383974 107 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 RNA5SP178-201ENST00000410380 128 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 RNU6-954P-201ENST00000411355 107 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 RN7SKP293-201ENST00000411389 296 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 VDAC1P9-201ENST00000412766 841 ntBASIC6.41□□□□□ -1.38
RNF20Q5VTR2 AL591848.1-201ENST00000413092 322 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms