Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MIR4260-201ENST00000583107 67 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AC125232.2-201ENST00000592457 143 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AL354718.1-201ENST00000619764 589 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AC007998.5-201ENST00000622938 237 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 CASC19-228ENST00000641414 1684 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AL589993.1-201ENST00000407450 2524 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AL137003.2-201ENST00000606924 2538 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AC114947.2-201ENST00000565748 2125 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 Y_RNA.350-201ENST00000365409 98 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 SNORA19-201ENST00000384737 128 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 MIR1252-201ENST00000408861 65 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 CYCSP52-201ENST00000422857 310 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 SDAD1P3-201ENST00000427380 333 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AL451062.2-201ENST00000427515 271 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AC133473.1-201ENST00000455173 299 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 RNU6-1132P-201ENST00000459214 107 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AC010631.1-201ENST00000474150 156 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 RPL21P103-201ENST00000479921 488 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AC026402.1-201ENST00000513642 170 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 Y_RNA.689-201ENST00000516589 107 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 IGHV3-76-201ENST00000522465 295 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 FXNP1-201ENST00000555153 337 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 U1.25-201ENST00000614085 162 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 TUG1_2.1-201ENST00000614234 87 ntBASIC6.4□□□□□ -1.38
PRPF38BQ5VTL8 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.4□□□□□ -1.39
PRPF38BQ5VTL8 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PRPF38BQ5VTL8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PRPF38BQ5VTL8 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
PRPF38BQ5VTL8 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PRPF38BQ5VTL8 AC009951.1-201ENST00000623674 2614 ntBASIC6.4□□□□□ -1.39
PRPF38BQ5VTL8 AC011455.2-201ENST00000599320 3336 ntBASIC6.4□□□□□ -1.39
PRPF38BQ5VTL8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
PRPF38BQ5VTL8 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AC000374.1-201ENST00000434698 1745 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AC010329.2-201ENST00000595195 2737 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 Y_RNA.106-201ENST00000363189 100 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 SNORA43.1-201ENST00000364863 140 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 RNU6-190P-201ENST00000384154 102 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 RNU1-46P-201ENST00000384425 164 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 MIR548M-201ENST00000408260 86 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 MIR1302-6-201ENST00000408466 90 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 RN7SKP126-201ENST00000411143 300 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 PGBD4P6-201ENST00000421501 610 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 PSMA2P3-201ENST00000429685 675 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AC108860.1-201ENST00000484521 383 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 VN1R104P-201ENST00000505115 1009 ntBASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.39□□□□□ -1.39
PRPF38BQ5VTL8 AC023157.2-201ENST00000540596 141 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms