Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC022905.1-201ENST00000503430 3048 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AP001541.1-201ENST00000623322 1904 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 Y_RNA.233-201ENST00000364407 101 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 RNA5SP205-201ENST00000364653 136 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 RNU6-715P-201ENST00000365204 103 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 Y_RNA.343-201ENST00000365354 112 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 RN7SKP69-201ENST00000365390 305 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 Y_RNA.458-201ENST00000384240 102 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 Y_RNA.497-201ENST00000384447 98 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 MIR433-201ENST00000384837 93 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 DPPA2P2-201ENST00000418220 897 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 MTND6P12-201ENST00000428247 522 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 PRDX3P3-201ENST00000447765 522 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AC007998.1-201ENST00000474156 672 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 OR51K1P-201ENST00000510214 950 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 MIR3189-201ENST00000578735 73 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 RNU4ATAC-201ENST00000580972 127 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AC091895.1-201ENST00000624494 256 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AL136313.1-201ENST00000624804 202 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AC006484.1-201ENST00000435086 1884 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 AC009643.2-201ENST00000603543 1448 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 GABPAP-201ENST00000419271 1356 ntBASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
RNFT1Q5M7Z0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 Y_RNA.541-201ENST00000384640 113 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 SNORA69.1-201ENST00000390904 137 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 Y_RNA.581-201ENST00000391017 97 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 BX323845.3-201ENST00000428215 527 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 ELOCP18-201ENST00000434209 337 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AC008267.6-201ENST00000441664 139 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 ACA64.1-201ENST00000459171 127 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AC068522.1-201ENST00000482895 345 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AC087190.1-201ENST00000484462 480 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AC107032.1-201ENST00000485945 480 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 PPIAP19-201ENST00000486414 492 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AC008958.1-201ENST00000511047 682 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 SCARNA24.2-201ENST00000516968 130 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AL133153.1-201ENST00000557756 303 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AC018552.1-201ENST00000562099 811 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 HSPE1P14-201ENST00000605812 302 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AL137067.2-201ENST00000621202 131 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 MTND1P7-201ENST00000632801 297 ntBASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.54□□□□□ -1.52
RNFT1Q5M7Z0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms