Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 Y_RNA.18-201ENST00000362461 102 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 RNU6-600P-201ENST00000362524 99 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 RNU6-289P-201ENST00000364093 107 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 SNORD116-8-201ENST00000384365 95 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL138880.1-201ENST00000405824 642 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 MTCYBP38-201ENST00000417160 1123 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 GLRXP1-201ENST00000423261 334 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 ZYG11AP1-201ENST00000430329 837 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL606662.1-201ENST00000445763 553 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 MTND2P19-201ENST00000449129 1012 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 CFTRP1-201ENST00000456646 183 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC097493.1-201ENST00000463958 372 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 RPL7P9-201ENST00000468715 747 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 RN7SL585P-201ENST00000470538 280 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 SYPL1P1-201ENST00000473622 768 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 RPS4XP13-201ENST00000483219 789 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 RN7SL812P-201ENST00000493791 279 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 LTV1P1-201ENST00000510683 1237 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC010486.3-201ENST00000511602 785 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 RN7SKP83-201ENST00000516512 178 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 MTCO1P47-201ENST00000523889 1271 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC239860.2-201ENST00000525886 270 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC090616.2-202ENST00000584248 222 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 BNIP3P24-201ENST00000593398 557 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC004987.4-201ENST00000603383 338 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL139395.1-201ENST00000603662 160 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AP000811.1-201ENST00000603803 651 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC079587.1-201ENST00000603846 277 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC110741.2-201ENST00000605278 268 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL451086.1-201ENST00000605596 223 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC004908.3-201ENST00000610248 625 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL603755.1-201ENST00000619504 163 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC048344.4-201ENST00000619744 527 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC140479.6-201ENST00000633535 357 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AC073346.2-201ENST00000624724 2058 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL031985.3-201ENST00000565390 2449 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL161912.2-201ENST00000565707 3007 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL079343.1-201ENST00000572358 1771 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 AL359893.1-201ENST00000447628 1580 ntBASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 AL391994.1-201ENST00000254724 282 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 RNU6-660P-201ENST00000364566 109 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 RPS20P14-201ENST00000412545 360 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 JKAMPP1-201ENST00000413804 919 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 AL953862.1-201ENST00000423016 168 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 RPS3AP54-201ENST00000435535 734 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 MTND4P6-201ENST00000438297 472 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 HMGB1P12-201ENST00000438594 598 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 RPL21P89-201ENST00000444021 467 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 AC017015.1-201ENST00000477387 286 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 PPIAP15-201ENST00000479662 484 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 UBE2CP3-201ENST00000502715 450 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 BNIP3P41-201ENST00000503774 571 ntBASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.5□□□□□ -1.85
PDLIM3Q53GG5 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms