Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.15□□□□□ -1.91
CD47Q08722 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.15□□□□□ -1.91
CD47Q08722 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CD47Q08722 AC093908.1-201ENST00000623125 8092 ntBASIC3.15□□□□□ -1.91
CD47Q08722 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CD47Q08722 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CD47Q08722 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD47Q08722 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.14□□□□□ -1.91
CD47Q08722 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD47Q08722 FRG1CP-201ENST00000358464 769 ntBASIC3.14□□□□□ -1.91
CD47Q08722 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD47Q08722 SNORD9-201ENST00000362566 104 ntBASIC3.14□□□□□ -1.91
CD47Q08722 Y_RNA.192-201ENST00000363977 102 ntBASIC3.14□□□□□ -1.91
CD47Q08722 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD47Q08722 MIR153-1-201ENST00000384914 90 ntBASIC3.14□□□□□ -1.91
CD47Q08722 RPL21P17-201ENST00000397467 475 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AL450338.1-201ENST00000407987 512 ntBASIC3.14□□□□□ -1.91
CD47Q08722 CYCSP19-201ENST00000411715 316 ntBASIC3.14□□□□□ -1.91
CD47Q08722 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.14□□□□□ -1.91
CD47Q08722 ELOCP9-201ENST00000418624 239 ntBASIC3.14□□□□□ -1.91
CD47Q08722 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.14□□□□□ -1.91
CD47Q08722 MRPS36P1-201ENST00000421291 307 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.14□□□□□ -1.91
CD47Q08722 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD47Q08722 AL445584.1-201ENST00000431451 330 ntBASIC3.14□□□□□ -1.91
CD47Q08722 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.14□□□□□ -1.91
CD47Q08722 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.14□□□□□ -1.91
CD47Q08722 SETP5-201ENST00000437270 562 ntBASIC3.14□□□□□ -1.91
CD47Q08722 USP9YP22-201ENST00000438971 294 ntBASIC3.14□□□□□ -1.91
CD47Q08722 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.14□□□□□ -1.91
CD47Q08722 NOTCH2P1-201ENST00000443481 624 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.14□□□□□ -1.91
CD47Q08722 AC008264.1-201ENST00000447612 367 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AC104073.1-201ENST00000451988 151 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AC097262.1-201ENST00000452559 548 ntBASIC3.14□□□□□ -1.91
CD47Q08722 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.14□□□□□ -1.91
CD47Q08722 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.14□□□□□ -1.91
CD47Q08722 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD47Q08722 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.14□□□□□ -1.91
CD47Q08722 AP002884.2-201ENST00000471647 395 ntBASIC3.14□□□□□ -1.91
CD47Q08722 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CD47Q08722 AC108734.3-201ENST00000481241 1165 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.14□□□□□ -1.91
CD47Q08722 AC078817.1-201ENST00000492623 435 ntBASIC3.14□□□□□ -1.91
CD47Q08722 BOLA3P3-201ENST00000505182 232 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.14□□□□□ -1.91
CD47Q08722 IGKV2D-36-201ENST00000518643 226 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.14□□□□□ -1.91
CD47Q08722 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.14□□□□□ -1.91
CD47Q08722 AP004242.1-201ENST00000533701 349 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.14□□□□□ -1.91
CD47Q08722 AL132657.2-201ENST00000564417 358 ntBASIC3.14□□□□□ -1.91
CD47Q08722 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.14□□□□□ -1.91
CD47Q08722 AC006116.10-201ENST00000591836 581 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AC010591.1-201ENST00000603941 649 ntBASIC3.14□□□□□ -1.91
CD47Q08722 AP001521.1-201ENST00000609150 300 ntBASIC3.14□□□□□ -1.91
CD47Q08722 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.14□□□□□ -1.91
CD47Q08722 AC026634.1-201ENST00000634369 198 ntBASIC3.14□□□□□ -1.91
CD47Q08722 MIR4278-201ENST00000636094 69 ntBASIC3.14□□□□□ -1.91
CD47Q08722 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD47Q08722 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CD47Q08722 AC032011.1-201ENST00000611703 1549 ntBASIC3.14□□□□□ -1.91
CD47Q08722 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
CD47Q08722 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CD47Q08722 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD47Q08722 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD47Q08722 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD47Q08722 AL359893.1-201ENST00000447628 1580 ntBASIC3.13□□□□□ -1.91
CD47Q08722 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CD47Q08722 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.13□□□□□ -1.91
CD47Q08722 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CD47Q08722 MFSD8-233ENST00000641482 4860 ntBASIC3.13□□□□□ -1.91
CD47Q08722 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CD47Q08722 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CD47Q08722 AL590084.1-201ENST00000407885 387 ntBASIC3.13□□□□□ -1.91
CD47Q08722 RNU6ATAC-201ENST00000408749 126 ntBASIC3.13□□□□□ -1.91
CD47Q08722 RN7SKP159-201ENST00000410657 292 ntBASIC3.13□□□□□ -1.91
CD47Q08722 RPS3AP25-201ENST00000411660 793 ntBASIC3.13□□□□□ -1.91
CD47Q08722 AC068533.2-201ENST00000411872 306 ntBASIC3.13□□□□□ -1.91
CD47Q08722 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.13□□□□□ -1.91
CD47Q08722 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CD47Q08722 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.13□□□□□ -1.91
CD47Q08722 MTCO2P20-201ENST00000437339 673 ntBASIC3.13□□□□□ -1.91
CD47Q08722 AC241584.1-201ENST00000438469 1241 ntBASIC3.13□□□□□ -1.91
CD47Q08722 MTCYBP31-201ENST00000438855 1122 ntBASIC3.13□□□□□ -1.91
CD47Q08722 AC007327.1-201ENST00000447461 264 ntBASIC3.13□□□□□ -1.91
CD47Q08722 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.13□□□□□ -1.91
CD47Q08722 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.13□□□□□ -1.91
CD47Q08722 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.13□□□□□ -1.91
CD47Q08722 OFD1P3Y-201ENST00000453312 783 ntBASIC3.13□□□□□ -1.91
CD47Q08722 HMGN3P1-201ENST00000453847 193 ntBASIC3.13□□□□□ -1.91
CD47Q08722 NECAP1P2-201ENST00000455668 727 ntBASIC3.13□□□□□ -1.91
CD47Q08722 ACTR3P3-201ENST00000480448 893 ntBASIC3.13□□□□□ -1.91
CD47Q08722 OR4G11P-201ENST00000492842 939 ntBASIC3.13□□□□□ -1.91
CD47Q08722 RPL5P23-201ENST00000496040 868 ntBASIC3.13□□□□□ -1.91
CD47Q08722 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
CD47Q08722 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.13□□□□□ -1.91
CD47Q08722 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.13□□□□□ -1.91
CD47Q08722 SNORA70.18-201ENST00000516696 98 ntBASIC3.13□□□□□ -1.91
CD47Q08722 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms