Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 HMGN2P3-201ENST00000433603 273 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.1□□□□□ -2.07
TFF3Q07654 AL590103.1-201ENST00000434488 307 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 HMGN2P5-201ENST00000436882 273 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.1□□□□□ -2.07
TFF3Q07654 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TFF3Q07654 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.1□□□□□ -2.07
TFF3Q07654 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.1□□□□□ -2.07
TFF3Q07654 SNORA31.1-201ENST00000515993 133 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 SNORA31.5-201ENST00000516190 133 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 SNORA31.26-201ENST00000517250 137 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 IGKV2-36-201ENST00000519999 223 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 CKS1BP7-201ENST00000522230 235 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 OR8X1P-201ENST00000534542 869 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.1□□□□□ -2.07
TFF3Q07654 AC010198.2-201ENST00000550612 259 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AC074029.1-201ENST00000552531 1044 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.1□□□□□ -2.07
TFF3Q07654 YWHAZP1-201ENST00000556286 722 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AC015712.3-201ENST00000559380 164 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AC005951.1-201ENST00000576706 485 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AC060766.3-201ENST00000591442 263 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 NTAN1P1-201ENST00000603150 646 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AL392112.1-201ENST00000605115 829 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AC010297.1-201ENST00000623948 149 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 CRYM-AS1-204ENST00000637983 556 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 AL592437.2-201ENST00000421655 2434 ntBASIC2.1□□□□□ -2.07
TFF3Q07654 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TFF3Q07654 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TFF3Q07654 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TFF3Q07654 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
TFF3Q07654 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
TFF3Q07654 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TFF3Q07654 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
TFF3Q07654 FAM133CP-201ENST00000332869 704 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
TFF3Q07654 MIR6073-201ENST00000352083 89 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 SNORD114-1-201ENST00000362705 72 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 BTBD10P2-201ENST00000404779 676 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 RNA5SP181-201ENST00000410246 98 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.09□□□□□ -2.07
TFF3Q07654 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.09□□□□□ -2.07
TFF3Q07654 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.09□□□□□ -2.07
TFF3Q07654 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.09□□□□□ -2.07
TFF3Q07654 HMGN1P5-201ENST00000448591 263 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.09□□□□□ -2.07
TFF3Q07654 AC133134.1-201ENST00000466800 359 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 SNRPGP3-201ENST00000469405 227 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.09□□□□□ -2.07
TFF3Q07654 AC026436.1-201ENST00000510537 270 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.09□□□□□ -2.07
TFF3Q07654 AP001317.1-201ENST00000531194 960 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 AC009163.5-201ENST00000575421 637 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 MIR5092-201ENST00000583139 88 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.09□□□□□ -2.07
TFF3Q07654 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.09□□□□□ -2.07
TFF3Q07654 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.09□□□□□ -2.07
TFF3Q07654 AC009159.1-201ENST00000618386 642 ntBASIC2.09□□□□□ -2.07
TFF3Q07654 AF127577.6-201ENST00000623352 2191 ntBASIC2.09□□□□□ -2.08
TFF3Q07654 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.09□□□□□ -2.08
TFF3Q07654 AC069528.2-201ENST00000624849 1991 ntBASIC2.09□□□□□ -2.08
TFF3Q07654 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
TFF3Q07654 AC092638.1-201ENST00000411966 1275 ntBASIC2.08□□□□□ -2.08
TFF3Q07654 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.08□□□□□ -2.08
TFF3Q07654 SEC63P1-201ENST00000425785 1258 ntBASIC2.08□□□□□ -2.08
TFF3Q07654 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.08□□□□□ -2.08
TFF3Q07654 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.08□□□□□ -2.08
TFF3Q07654 AL354710.1-201ENST00000453641 246 ntBASIC2.08□□□□□ -2.08
TFF3Q07654 RPL30P9-201ENST00000465586 330 ntBASIC2.08□□□□□ -2.08
TFF3Q07654 RPS20P22-201ENST00000473700 357 ntBASIC2.08□□□□□ -2.08
TFF3Q07654 RPL9P6-201ENST00000492764 598 ntBASIC2.08□□□□□ -2.08
TFF3Q07654 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.08□□□□□ -2.08
TFF3Q07654 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.08□□□□□ -2.08
TFF3Q07654 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.08□□□□□ -2.08
TFF3Q07654 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TFF3Q07654 AC026464.5-201ENST00000562497 722 ntBASIC2.08□□□□□ -2.08
TFF3Q07654 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.08□□□□□ -2.08
TFF3Q07654 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.08□□□□□ -2.08
TFF3Q07654 AL137847.3-201ENST00000611521 109 ntBASIC2.08□□□□□ -2.08
TFF3Q07654 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.08□□□□□ -2.08
TFF3Q07654 PISRT1-201ENST00000626175 531 ntBASIC2.08□□□□□ -2.08
TFF3Q07654 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
TFF3Q07654 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.07□□□□□ -2.08
TFF3Q07654 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.07□□□□□ -2.08
TFF3Q07654 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TFF3Q07654 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.07□□□□□ -2.08
TFF3Q07654 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TFF3Q07654 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
TFF3Q07654 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.07□□□□□ -2.08
TFF3Q07654 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TFF3Q07654 RNU6-253P-201ENST00000384730 105 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 MIR142-201ENST00000384835 87 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TFF3Q07654 RN7SKP140-201ENST00000411196 284 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.07□□□□□ -2.08
TFF3Q07654 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.07□□□□□ -2.08
TFF3Q07654 OR4G11P-201ENST00000492842 939 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 RPL23AP49-201ENST00000492925 468 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 AC108210.2-201ENST00000503681 201 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms