Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC015712.3-201ENST00000559380 164 ntBASIC2.88□□□□□ -1.95
SCN7AQ01118 AC026464.5-201ENST00000562497 722 ntBASIC2.88□□□□□ -1.95
SCN7AQ01118 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN7AQ01118 AC117529.2-201ENST00000512159 2068 ntBASIC2.88□□□□□ -1.95
SCN7AQ01118 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SCN7AQ01118 SNORA64-201ENST00000384674 134 ntBASIC2.87□□□□□ -1.95
SCN7AQ01118 AC107081.1-201ENST00000414975 361 ntBASIC2.87□□□□□ -1.95
SCN7AQ01118 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.87□□□□□ -1.95
SCN7AQ01118 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN7AQ01118 AC010881.1-201ENST00000433830 235 ntBASIC2.87□□□□□ -1.95
SCN7AQ01118 MTCO3P11-201ENST00000455103 774 ntBASIC2.87□□□□□ -1.95
SCN7AQ01118 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.87□□□□□ -1.95
SCN7AQ01118 RNA5SP385-201ENST00000515947 110 ntBASIC2.87□□□□□ -1.95
SCN7AQ01118 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN7AQ01118 MIR4506-201ENST00000584693 77 ntBASIC2.87□□□□□ -1.95
SCN7AQ01118 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.87□□□□□ -1.95
SCN7AQ01118 AC123768.4-201ENST00000616244 701 ntBASIC2.87□□□□□ -1.95
SCN7AQ01118 PISRT1-201ENST00000626175 531 ntBASIC2.87□□□□□ -1.95
SCN7AQ01118 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SCN7AQ01118 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCN7AQ01118 AC009501.3-201ENST00000605001 1352 ntBASIC2.87□□□□□ -1.95
SCN7AQ01118 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN7AQ01118 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SCN7AQ01118 DYNLT3P1-201ENST00000378574 347 ntBASIC2.86□□□□□ -1.95
SCN7AQ01118 FAM172BP-201ENST00000487497 1089 ntBASIC2.86□□□□□ -1.95
SCN7AQ01118 RNU6-964P-201ENST00000516524 69 ntBASIC2.86□□□□□ -1.95
SCN7AQ01118 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SCN7AQ01118 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.86□□□□□ -1.95
SCN7AQ01118 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN7AQ01118 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SCN7AQ01118 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN7AQ01118 AC092326.2-201ENST00000624772 1561 ntBASIC2.86□□□□□ -1.95
SCN7AQ01118 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN7AQ01118 PNPT1P2-201ENST00000456768 2050 ntBASIC2.86□□□□□ -1.95
SCN7AQ01118 RNU1-91P-201ENST00000364746 163 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 AL023284.1-201ENST00000403956 276 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 AL139156.1-201ENST00000412785 841 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 AC106901.1-201ENST00000425086 698 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 RPS24P8-201ENST00000431490 402 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 AL354710.1-201ENST00000453641 246 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN7AQ01118 AC107222.1-201ENST00000510899 637 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN7AQ01118 AC044913.1-201ENST00000557200 430 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 AC099063.3-201ENST00000642066 185 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN7AQ01118 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.85□□□□□ -1.95
SCN7AQ01118 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN7AQ01118 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN7AQ01118 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN7AQ01118 AL031736.2-201ENST00000426573 787 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 MUPP-201ENST00000438111 566 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.85□□□□□ -1.95
SCN7AQ01118 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN7AQ01118 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN7AQ01118 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SCN7AQ01118 TPMTP1-201ENST00000592307 737 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 AC002076.2-201ENST00000617362 122 ntBASIC2.85□□□□□ -1.95
SCN7AQ01118 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
SCN7AQ01118 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
SCN7AQ01118 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SCN7AQ01118 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN7AQ01118 SNORD21-201ENST00000383953 95 ntBASIC2.84□□□□□ -1.95
SCN7AQ01118 RN7SKP32-201ENST00000410167 303 ntBASIC2.84□□□□□ -1.95
SCN7AQ01118 PTP4A1P1-201ENST00000420539 515 ntBASIC2.84□□□□□ -1.95
SCN7AQ01118 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.84□□□□□ -1.95
SCN7AQ01118 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN7AQ01118 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN7AQ01118 VTA1P2-201ENST00000520205 911 ntBASIC2.84□□□□□ -1.95
SCN7AQ01118 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.84□□□□□ -1.95
SCN7AQ01118 AC074029.1-201ENST00000552531 1044 ntBASIC2.84□□□□□ -1.95
SCN7AQ01118 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN7AQ01118 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN7AQ01118 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN7AQ01118 AC067852.7-201ENST00000623270 535 ntBASIC2.84□□□□□ -1.95
SCN7AQ01118 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SCN7AQ01118 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
SCN7AQ01118 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SCN7AQ01118 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN7AQ01118 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SCN7AQ01118 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SCN7AQ01118 RANP7-201ENST00000418085 644 ntBASIC2.83□□□□□ -1.96
SCN7AQ01118 PTP4A1P7-201ENST00000423476 514 ntBASIC2.83□□□□□ -1.96
SCN7AQ01118 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN7AQ01118 RPS27AP9-201ENST00000477681 438 ntBASIC2.83□□□□□ -1.96
SCN7AQ01118 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN7AQ01118 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN7AQ01118 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SCN7AQ01118 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SCN7AQ01118 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN7AQ01118 SNRPGP18-201ENST00000553000 214 ntBASIC2.83□□□□□ -1.96
SCN7AQ01118 AL645944.1-201ENST00000603857 493 ntBASIC2.83□□□□□ -1.96
SCN7AQ01118 AC016727.1-205ENST00000605437 569 ntBASIC2.83□□□□□ -1.96
SCN7AQ01118 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SCN7AQ01118 AL160394.1-201ENST00000624765 724 ntBASIC2.83□□□□□ -1.96
SCN7AQ01118 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN7AQ01118 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN7AQ01118 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN7AQ01118 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms