Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDKL1Q00532 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDKL1Q00532 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDKL1Q00532 AC032011.1-201ENST00000611703 1549 ntBASIC3.39□□□□□ -1.87
CDKL1Q00532 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDKL1Q00532 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
CDKL1Q00532 ZNF285B-201ENST00000561698 1767 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.38□□□□□ -1.87
CDKL1Q00532 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
CDKL1Q00532 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CDKL1Q00532 RNU1-64P-201ENST00000365443 163 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 SNORD6-201ENST00000365444 73 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.38□□□□□ -1.87
CDKL1Q00532 RNU6-906P-201ENST00000384700 70 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.38□□□□□ -1.87
CDKL1Q00532 SKINT1L-201ENST00000401057 817 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 RNU6-584P-201ENST00000410350 95 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 RN7SKP202-201ENST00000410439 330 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 RNA5SP80-201ENST00000410475 111 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AC068533.2-201ENST00000411872 306 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.38□□□□□ -1.87
CDKL1Q00532 MTATP6P20-201ENST00000414147 562 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 SYF2P2-201ENST00000417620 583 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL1Q00532 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.38□□□□□ -1.87
CDKL1Q00532 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDKL1Q00532 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.38□□□□□ -1.87
CDKL1Q00532 AC125238.1-201ENST00000448842 249 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL1Q00532 RBMY2UP-201ENST00000453474 324 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 RPS27P29-201ENST00000463110 252 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 RPL23AP55-201ENST00000498163 452 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL1Q00532 MTCYBP17-201ENST00000503579 789 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL1Q00532 TXNP6-201ENST00000510190 310 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 RNY4P37-201ENST00000516225 96 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDKL1Q00532 MED28P5-201ENST00000528254 438 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.38□□□□□ -1.87
CDKL1Q00532 AC103843.2-201ENST00000530523 682 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AP003385.6-201ENST00000531603 374 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL1Q00532 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.38□□□□□ -1.87
CDKL1Q00532 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL1Q00532 GTF2IP22-201ENST00000554443 182 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL1Q00532 MTND1P8-201ENST00000571424 950 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AL035411.2-201ENST00000604022 421 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AC021749.1-201ENST00000604322 607 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.38□□□□□ -1.87
CDKL1Q00532 U4.6-201ENST00000621618 127 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 MTND2P41-201ENST00000637599 773 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 U6.101-201ENST00000637707 76 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 AL365440.1-201ENST00000436135 2167 ntBASIC3.38□□□□□ -1.87
CDKL1Q00532 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDKL1Q00532 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDKL1Q00532 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL1Q00532 SAGE4P-201ENST00000442271 3381 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL1Q00532 AL157700.1-201ENST00000561973 1432 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
CDKL1Q00532 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.37□□□□□ -1.87
CDKL1Q00532 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKL1Q00532 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL1Q00532 SNRPEP3-201ENST00000338402 276 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 RNA5SP124-201ENST00000362739 110 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 RNA5SP258-201ENST00000362750 119 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL1Q00532 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.37□□□□□ -1.87
CDKL1Q00532 RNU6-328P-201ENST00000390887 106 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL1Q00532 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKL1Q00532 AL121972.1-201ENST00000402023 252 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 AL138880.1-201ENST00000405824 642 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 AL590084.1-201ENST00000407885 387 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.37□□□□□ -1.87
CDKL1Q00532 AIMP1P1-201ENST00000418670 937 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 BX890604.2-201ENST00000427883 474 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.37□□□□□ -1.87
CDKL1Q00532 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 USP9YP24-201ENST00000434374 697 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 USP9YP17-201ENST00000444617 696 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 PTENP1-201ENST00000447117 1215 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.37□□□□□ -1.87
CDKL1Q00532 AC004022.1-201ENST00000447766 1066 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 AL133547.1-201ENST00000448546 220 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.37□□□□□ -1.87
CDKL1Q00532 HMGN2P7-201ENST00000456186 273 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 USP9YP25-201ENST00000457708 443 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 AC106707.2-201ENST00000484182 374 ntBASIC3.37□□□□□ -1.87
CDKL1Q00532 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.37□□□□□ -1.87
CDKL1Q00532 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms