Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.57□□□□□ -2
H3F3AP84243 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
H3F3AP84243 FAM60DP-201ENST00000524174 632 ntBASIC2.57□□□□□ -2
H3F3AP84243 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.57□□□□□ -2
H3F3AP84243 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.57□□□□□ -2
H3F3AP84243 AC022080.3-201ENST00000544433 482 ntBASIC2.57□□□□□ -2
H3F3AP84243 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.57□□□□□ -2
H3F3AP84243 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.57□□□□□ -2
H3F3AP84243 OR4G1P-201ENST00000588632 938 ntBASIC2.57□□□□□ -2
H3F3AP84243 AL627309.6-201ENST00000606857 840 ntBASIC2.57□□□□□ -2
H3F3AP84243 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.57□□□□□ -2
H3F3AP84243 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.57□□□□□ -2
H3F3AP84243 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3AP84243 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3AP84243 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3AP84243 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3AP84243 RNU6-1243P-201ENST00000364028 107 ntBASIC2.56□□□□□ -2
H3F3AP84243 MIR128-1-201ENST00000384921 82 ntBASIC2.56□□□□□ -2
H3F3AP84243 AC010385.1-201ENST00000412374 256 ntBASIC2.56□□□□□ -2
H3F3AP84243 AL356806.1-201ENST00000422524 916 ntBASIC2.56□□□□□ -2
H3F3AP84243 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.56□□□□□ -2
H3F3AP84243 MTATP6P4-201ENST00000427725 675 ntBASIC2.56□□□□□ -2
H3F3AP84243 AC022018.1-201ENST00000430685 241 ntBASIC2.56□□□□□ -2
H3F3AP84243 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3AP84243 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.56□□□□□ -2
H3F3AP84243 AC112653.1-201ENST00000443851 386 ntBASIC2.56□□□□□ -2
H3F3AP84243 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.56□□□□□ -2
H3F3AP84243 RPL23AP11-201ENST00000475260 469 ntBASIC2.56□□□□□ -2
H3F3AP84243 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.56□□□□□ -2
H3F3AP84243 AP004217.1-201ENST00000480579 346 ntBASIC2.56□□□□□ -2
H3F3AP84243 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.56□□□□□ -2
H3F3AP84243 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
H3F3AP84243 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3AP84243 SCGB1D5P-201ENST00000515134 247 ntBASIC2.56□□□□□ -2
H3F3AP84243 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.56□□□□□ -2
H3F3AP84243 AC022690.1-201ENST00000526681 550 ntBASIC2.56□□□□□ -2
H3F3AP84243 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.56□□□□□ -2
H3F3AP84243 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.56□□□□□ -2
H3F3AP84243 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.56□□□□□ -2
H3F3AP84243 MIR4504-201ENST00000577413 92 ntBASIC2.56□□□□□ -2
H3F3AP84243 COX6CP3-201ENST00000580869 223 ntBASIC2.56□□□□□ -2
H3F3AP84243 AC023043.3-201ENST00000593113 385 ntBASIC2.56□□□□□ -2
H3F3AP84243 AC005000.2-201ENST00000605468 310 ntBASIC2.56□□□□□ -2
H3F3AP84243 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.56□□□□□ -2
H3F3AP84243 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3AP84243 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.56□□□□□ -2
H3F3AP84243 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
H3F3AP84243 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
H3F3AP84243 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.56□□□□□ -2
H3F3AP84243 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.55□□□□□ -2
H3F3AP84243 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.55□□□□□ -2
H3F3AP84243 RNU6-374P-201ENST00000364146 108 ntBASIC2.55□□□□□ -2
H3F3AP84243 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
H3F3AP84243 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.55□□□□□ -2
H3F3AP84243 RNU6-837P-201ENST00000391056 108 ntBASIC2.55□□□□□ -2
H3F3AP84243 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
H3F3AP84243 AC073264.1-201ENST00000411508 416 ntBASIC2.55□□□□□ -2
H3F3AP84243 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.55□□□□□ -2
H3F3AP84243 AL451074.5-201ENST00000415894 435 ntBASIC2.55□□□□□ -2
H3F3AP84243 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.55□□□□□ -2
H3F3AP84243 DUTP6-201ENST00000425573 462 ntBASIC2.55□□□□□ -2
H3F3AP84243 AL645568.2-201ENST00000432815 1337 ntBASIC2.55□□□□□ -2
H3F3AP84243 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.55□□□□□ -2
H3F3AP84243 RSL24D1P2-201ENST00000445584 366 ntBASIC2.55□□□□□ -2
H3F3AP84243 AL359893.1-201ENST00000447628 1580 ntBASIC2.55□□□□□ -2
H3F3AP84243 snoU13.4-201ENST00000458916 104 ntBASIC2.55□□□□□ -2
H3F3AP84243 AC008571.1-201ENST00000467232 300 ntBASIC2.55□□□□□ -2
H3F3AP84243 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.55□□□□□ -2
H3F3AP84243 GAPDHP39-201ENST00000481866 979 ntBASIC2.55□□□□□ -2
H3F3AP84243 AC117522.3-201ENST00000507974 584 ntBASIC2.55□□□□□ -2
H3F3AP84243 AC098799.2-201ENST00000509466 868 ntBASIC2.55□□□□□ -2
H3F3AP84243 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
H3F3AP84243 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.55□□□□□ -2
H3F3AP84243 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.55□□□□□ -2
H3F3AP84243 GMPSP1-201ENST00000514075 579 ntBASIC2.55□□□□□ -2
H3F3AP84243 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
H3F3AP84243 IGKV2D-36-201ENST00000518643 226 ntBASIC2.55□□□□□ -2
H3F3AP84243 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.55□□□□□ -2
H3F3AP84243 AC139103.1-201ENST00000534696 1030 ntBASIC2.55□□□□□ -2
H3F3AP84243 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
H3F3AP84243 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.55□□□□□ -2
H3F3AP84243 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.55□□□□□ -2
H3F3AP84243 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.55□□□□□ -2
H3F3AP84243 AC024153.1-201ENST00000603103 365 ntBASIC2.55□□□□□ -2
H3F3AP84243 AL355493.4-201ENST00000618530 292 ntBASIC2.55□□□□□ -2
H3F3AP84243 AC009039.2-201ENST00000624524 529 ntBASIC2.55□□□□□ -2
H3F3AP84243 AP000676.4-201ENST00000624659 623 ntBASIC2.55□□□□□ -2
H3F3AP84243 AC233263.6-201ENST00000631132 1963 ntBASIC2.55□□□□□ -2
H3F3AP84243 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.55□□□□□ -2
H3F3AP84243 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.55□□□□□ -2
H3F3AP84243 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
H3F3AP84243 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
H3F3AP84243 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
H3F3AP84243 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
H3F3AP84243 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.54□□□□□ -2
H3F3AP84243 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.54□□□□□ -2
H3F3AP84243 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.54□□□□□ -2
H3F3AP84243 MIR512-1-201ENST00000384913 84 ntBASIC2.54□□□□□ -2
H3F3AP84243 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.54□□□□□ -2
H3F3AP84243 RNU4-78P-201ENST00000410940 126 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms