Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL590282.1-201ENST00000610379 1136 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 CR392039.5-201ENST00000623201 510 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AC006963.1-201ENST00000624003 1052 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AP000720.1-201ENST00000625091 483 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.14□□□□□ -1.91
PKNOX1P55347 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AL136520.1-201ENST00000600311 1322 ntBASIC3.14□□□□□ -1.91
PKNOX1P55347 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.14□□□□□ -1.91
PKNOX1P55347 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PKNOX1P55347 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKNOX1P55347 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.13□□□□□ -1.91
PKNOX1P55347 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PKNOX1P55347 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AL049781.1-201ENST00000623195 3585 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.13□□□□□ -1.91
PKNOX1P55347 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
PKNOX1P55347 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PKNOX1P55347 RNU1-64P-201ENST00000365443 163 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
PKNOX1P55347 RPL23AP47-201ENST00000408017 460 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 RNU4-78P-201ENST00000410940 126 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 AC069282.1-201ENST00000411911 526 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 RPS29P4-201ENST00000414733 161 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.13□□□□□ -1.91
PKNOX1P55347 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 Z93242.1-201ENST00000427102 353 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 AL035410.1-201ENST00000427409 427 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 OR2AS1P-201ENST00000427827 319 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.13□□□□□ -1.91
PKNOX1P55347 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.13□□□□□ -1.91
PKNOX1P55347 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX1P55347 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 RPL26P28-201ENST00000451325 435 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 RPS24P6-201ENST00000452670 400 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 MRPL42P4-201ENST00000453267 443 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AC091179.1-201ENST00000461606 579 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AC012181.1-201ENST00000479895 423 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AC109635.4-202ENST00000531666 412 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 HIGD1AP1-201ENST00000550979 275 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.13□□□□□ -1.91
PKNOX1P55347 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AC044913.1-201ENST00000557200 430 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 AC005951.1-201ENST00000576706 485 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AC126365.2-201ENST00000580630 379 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 AP001542.2-201ENST00000593141 364 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 AC068620.3-201ENST00000602749 560 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 GAS5-AS1-201ENST00000602767 694 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AL451074.6-201ENST00000608512 729 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 AL512427.1-201ENST00000618593 349 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PKNOX1P55347 AC039056.2-201ENST00000622261 511 ntBASIC3.13□□□□□ -1.91
PKNOX1P55347 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.13□□□□□ -1.91
PKNOX1P55347 MTND4P34-201ENST00000572715 1371 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PKNOX1P55347 AC110774.1-201ENST00000623567 2018 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
PKNOX1P55347 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PKNOX1P55347 MIR554-201ENST00000384874 96 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 HMGN1P24-201ENST00000412282 298 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AC245054.2-201ENST00000415639 319 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 HSFY4P-201ENST00000415994 1181 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.12□□□□□ -1.91
PKNOX1P55347 RPL21P66-201ENST00000426566 466 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.12□□□□□ -1.91
PKNOX1P55347 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.12□□□□□ -1.91
PKNOX1P55347 RPL7P52-201ENST00000449200 742 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 ELOCP23-201ENST00000452014 332 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 NPM1P13-201ENST00000452663 865 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.12□□□□□ -1.91
PKNOX1P55347 ARPC3P2-201ENST00000457786 533 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AC006483.1-201ENST00000487308 313 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AC084024.2-201ENST00000503480 791 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.12□□□□□ -1.91
PKNOX1P55347 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.12□□□□□ -1.91
PKNOX1P55347 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PKNOX1P55347 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PKNOX1P55347 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.12□□□□□ -1.91
PKNOX1P55347 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 ARL2BPP5-201ENST00000523141 481 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.12□□□□□ -1.91
PKNOX1P55347 AC019227.1-201ENST00000526902 510 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
PKNOX1P55347 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.12□□□□□ -1.91
PKNOX1P55347 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.12□□□□□ -1.91
PKNOX1P55347 LSM6P2-201ENST00000552208 177 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AC093519.1-201ENST00000566109 298 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AC090079.2-201ENST00000575289 768 ntBASIC3.12□□□□□ -1.91
PKNOX1P55347 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms