Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 BX649567.1-201ENST00000642071 1134 ntBASIC3.67□□□□□ -1.82
VCPP55072 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VCPP55072 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.67□□□□□ -1.82
VCPP55072 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.67□□□□□ -1.82
VCPP55072 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
VCPP55072 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VCPP55072 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.66□□□□□ -1.82
VCPP55072 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VCPP55072 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VCPP55072 FRG1CP-201ENST00000358464 769 ntBASIC3.66□□□□□ -1.82
VCPP55072 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.66□□□□□ -1.82
VCPP55072 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
VCPP55072 RNU6-549P-201ENST00000384433 107 ntBASIC3.66□□□□□ -1.82
VCPP55072 EI24P2-201ENST00000397776 1076 ntBASIC3.66□□□□□ -1.82
VCPP55072 AL603865.2-201ENST00000401679 213 ntBASIC3.66□□□□□ -1.82
VCPP55072 RNU6-272P-201ENST00000411028 104 ntBASIC3.66□□□□□ -1.82
VCPP55072 RN7SKP53-201ENST00000411337 315 ntBASIC3.66□□□□□ -1.82
VCPP55072 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.66□□□□□ -1.82
VCPP55072 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VCPP55072 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.66□□□□□ -1.82
VCPP55072 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.66□□□□□ -1.82
VCPP55072 RPL27AP5-201ENST00000469428 449 ntBASIC3.66□□□□□ -1.82
VCPP55072 PRDX3P4-201ENST00000470828 747 ntBASIC3.66□□□□□ -1.82
VCPP55072 AC093663.1-201ENST00000497190 394 ntBASIC3.66□□□□□ -1.82
VCPP55072 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VCPP55072 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VCPP55072 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.66□□□□□ -1.82
VCPP55072 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.66□□□□□ -1.82
VCPP55072 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.66□□□□□ -1.82
VCPP55072 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.66□□□□□ -1.82
VCPP55072 UBE2NP1-201ENST00000545592 458 ntBASIC3.66□□□□□ -1.82
VCPP55072 AC010198.2-201ENST00000550612 259 ntBASIC3.66□□□□□ -1.82
VCPP55072 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.66□□□□□ -1.82
VCPP55072 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VCPP55072 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.66□□□□□ -1.82
VCPP55072 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.66□□□□□ -1.82
VCPP55072 AC092953.2-201ENST00000608000 699 ntBASIC3.66□□□□□ -1.82
VCPP55072 AF129408.1-201ENST00000608767 431 ntBASIC3.66□□□□□ -1.82
VCPP55072 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.66□□□□□ -1.82
VCPP55072 RNU6-1192P-201ENST00000612197 107 ntBASIC3.66□□□□□ -1.82
VCPP55072 MIR7106-201ENST00000612419 65 ntBASIC3.66□□□□□ -1.82
VCPP55072 RNU6-489P-201ENST00000618289 107 ntBASIC3.66□□□□□ -1.82
VCPP55072 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.66□□□□□ -1.82
VCPP55072 AP003355.3-201ENST00000623465 114 ntBASIC3.66□□□□□ -1.82
VCPP55072 AC139713.2-210ENST00000641741 992 ntBASIC3.66□□□□□ -1.82
VCPP55072 AL359893.1-201ENST00000447628 1580 ntBASIC3.66□□□□□ -1.82
VCPP55072 PWAR6-201ENST00000552334 4618 ntBASIC3.66□□□□□ -1.82
VCPP55072 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
VCPP55072 MTND4P9-201ENST00000507819 1346 ntBASIC3.66□□□□□ -1.82
VCPP55072 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VCPP55072 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VCPP55072 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VCPP55072 AC005183.1-201ENST00000603687 1979 ntBASIC3.65□□□□□ -1.82
VCPP55072 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.65□□□□□ -1.82
VCPP55072 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VCPP55072 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
VCPP55072 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
VCPP55072 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VCPP55072 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
VCPP55072 FTLP6-201ENST00000355274 422 ntBASIC3.65□□□□□ -1.83
VCPP55072 AC017079.2-201ENST00000416102 485 ntBASIC3.65□□□□□ -1.83
VCPP55072 PAICSP7-201ENST00000419829 962 ntBASIC3.65□□□□□ -1.83
VCPP55072 RPL21P66-201ENST00000426566 466 ntBASIC3.65□□□□□ -1.83
VCPP55072 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.65□□□□□ -1.83
VCPP55072 AC011242.1-201ENST00000433596 1158 ntBASIC3.65□□□□□ -1.83
VCPP55072 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.65□□□□□ -1.83
VCPP55072 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.65□□□□□ -1.83
VCPP55072 AL357552.1-201ENST00000445254 415 ntBASIC3.65□□□□□ -1.83
VCPP55072 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.65□□□□□ -1.83
VCPP55072 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.65□□□□□ -1.83
VCPP55072 SYPL1P1-201ENST00000473622 768 ntBASIC3.65□□□□□ -1.83
VCPP55072 AC087879.1-201ENST00000474343 374 ntBASIC3.65□□□□□ -1.83
VCPP55072 AP000893.1-201ENST00000474462 794 ntBASIC3.65□□□□□ -1.83
VCPP55072 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.65□□□□□ -1.83
VCPP55072 AC119751.1-201ENST00000513357 765 ntBASIC3.65□□□□□ -1.83
VCPP55072 RNU6-1073P-201ENST00000517182 106 ntBASIC3.65□□□□□ -1.83
VCPP55072 NDUFB9P3-201ENST00000521269 501 ntBASIC3.65□□□□□ -1.83
VCPP55072 AF279873.1-201ENST00000523393 313 ntBASIC3.65□□□□□ -1.83
VCPP55072 AC019227.1-201ENST00000526902 510 ntBASIC3.65□□□□□ -1.83
VCPP55072 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.65□□□□□ -1.83
VCPP55072 AL389895.1-201ENST00000554127 252 ntBASIC3.65□□□□□ -1.83
VCPP55072 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.65□□□□□ -1.83
VCPP55072 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.65□□□□□ -1.83
VCPP55072 NIFKP8-201ENST00000560500 874 ntBASIC3.65□□□□□ -1.83
VCPP55072 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.65□□□□□ -1.83
VCPP55072 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.65□□□□□ -1.83
VCPP55072 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.65□□□□□ -1.83
VCPP55072 BNIP3P10-201ENST00000605360 577 ntBASIC3.65□□□□□ -1.83
VCPP55072 AC006023.2-201ENST00000609916 167 ntBASIC3.65□□□□□ -1.83
VCPP55072 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VCPP55072 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.65□□□□□ -1.83
VCPP55072 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VCPP55072 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
VCPP55072 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
VCPP55072 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VCPP55072 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VCPP55072 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.65□□□□□ -1.83
VCPP55072 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VCPP55072 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VCPP55072 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms