Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIMK1P53667 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 AF117829.1-206ENST00000621883 3802 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIMK1P53667 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIMK1P53667 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LIMK1P53667 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LIMK1P53667 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LIMK1P53667 AL136164.4-201ENST00000625013 2135 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.86□□□□□ -1.79
LIMK1P53667 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
LIMK1P53667 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.86□□□□□ -1.79
LIMK1P53667 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LIMK1P53667 RNU6-263P-201ENST00000363811 107 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LIMK1P53667 AC016769.3-201ENST00000396562 315 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LIMK1P53667 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMK1P53667 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LIMK1P53667 AL358472.1-201ENST00000431295 329 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 ATP5F1P1-201ENST00000433775 569 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 ATP5HP2-201ENST00000433885 485 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 HMGN2P20-201ENST00000437531 273 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.86□□□□□ -1.79
LIMK1P53667 MTCYBP31-201ENST00000438855 1122 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 AC092427.1-201ENST00000439177 601 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.86□□□□□ -1.79
LIMK1P53667 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMK1P53667 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.86□□□□□ -1.79
LIMK1P53667 MTND1P16-201ENST00000465177 898 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 RN7SL330P-201ENST00000469709 307 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMK1P53667 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.86□□□□□ -1.79
LIMK1P53667 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LIMK1P53667 HSPD1P15-201ENST00000505573 1122 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 MTCO3P44-201ENST00000510977 541 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.86□□□□□ -1.79
LIMK1P53667 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.86□□□□□ -1.79
LIMK1P53667 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMK1P53667 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.86□□□□□ -1.79
LIMK1P53667 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.86□□□□□ -1.79
LIMK1P53667 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.86□□□□□ -1.79
LIMK1P53667 MIR5047-201ENST00000579212 100 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 MIR4760-201ENST00000585040 80 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMK1P53667 AC006254.3-201ENST00000603353 884 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 AL163642.2-201ENST00000604722 1019 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 AC091167.4-201ENST00000605079 184 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMK1P53667 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 AC109809.1-201ENST00000619665 545 ntBASIC3.86□□□□□ -1.79
LIMK1P53667 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LIMK1P53667 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.86□□□□□ -1.79
LIMK1P53667 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.86□□□□□ -1.79
LIMK1P53667 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LIMK1P53667 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.86□□□□□ -1.79
LIMK1P53667 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.85□□□□□ -1.79
LIMK1P53667 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LIMK1P53667 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
LIMK1P53667 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.85□□□□□ -1.79
LIMK1P53667 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 RNU6-216P-201ENST00000363282 104 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 RNU6-1122P-201ENST00000384449 107 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 MTND4LP20-201ENST00000402379 270 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AL024474.1-201ENST00000404655 591 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 RNA5SP56-201ENST00000410277 118 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 RNA5SP80-201ENST00000410475 111 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.85□□□□□ -1.79
LIMK1P53667 AC084290.1-201ENST00000434995 374 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AC127537.2-201ENST00000439258 465 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 BX510359.1-201ENST00000456973 237 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 USP9YP25-201ENST00000457708 443 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AC092754.2-201ENST00000463506 460 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AC010285.1-201ENST00000470580 392 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 RN7SL807P-201ENST00000470923 297 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AC108729.1-201ENST00000487812 947 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 RPL31P61-201ENST00000496160 376 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AC108078.3-201ENST00000502633 489 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 HMGB1P22-201ENST00000505315 124 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.85□□□□□ -1.79
LIMK1P53667 MIR2114-201ENST00000516645 80 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 RNA5SP468-201ENST00000516782 93 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AC090136.1-201ENST00000520009 240 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.85□□□□□ -1.79
LIMK1P53667 OR5B10P-201ENST00000532869 642 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.85□□□□□ -1.79
LIMK1P53667 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.85□□□□□ -1.79
LIMK1P53667 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.85□□□□□ -1.79
LIMK1P53667 AC090695.1-201ENST00000561269 1222 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.85□□□□□ -1.79
LIMK1P53667 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 AL669831.4-202ENST00000590817 238 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 AC114878.2-201ENST00000604863 1251 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AL451074.6-201ENST00000608512 729 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AC073968.1-201ENST00000618594 637 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms