Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.48□□□□□ -1.69
COPAP53621 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COPAP53621 AL359893.1-201ENST00000447628 1580 ntBASIC4.48□□□□□ -1.69
COPAP53621 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.47□□□□□ -1.69
COPAP53621 AC097504.1-201ENST00000515103 2415 ntBASIC4.47□□□□□ -1.69
COPAP53621 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COPAP53621 PABPC1P7-201ENST00000413177 1513 ntBASIC4.47□□□□□ -1.69
COPAP53621 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COPAP53621 AC097714.1-201ENST00000511272 1647 ntBASIC4.47□□□□□ -1.69
COPAP53621 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.47□□□□□ -1.69
COPAP53621 FGF7P2-201ENST00000332473 296 ntBASIC4.47□□□□□ -1.69
COPAP53621 RNU6-28P-201ENST00000362378 107 ntBASIC4.47□□□□□ -1.69
COPAP53621 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 MIR3065-201ENST00000390137 79 ntBASIC4.47□□□□□ -1.69
COPAP53621 U8.14-201ENST00000390843 143 ntBASIC4.47□□□□□ -1.69
COPAP53621 MTND4LP20-201ENST00000402379 270 ntBASIC4.47□□□□□ -1.69
COPAP53621 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.47□□□□□ -1.69
COPAP53621 RN7SKP266-201ENST00000410232 287 ntBASIC4.47□□□□□ -1.69
COPAP53621 RNA5SP104-201ENST00000410989 118 ntBASIC4.47□□□□□ -1.69
COPAP53621 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.47□□□□□ -1.69
COPAP53621 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.47□□□□□ -1.69
COPAP53621 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 RPS7P13-201ENST00000413955 498 ntBASIC4.47□□□□□ -1.69
COPAP53621 UBTFL3-201ENST00000418934 1024 ntBASIC4.47□□□□□ -1.69
COPAP53621 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.47□□□□□ -1.69
COPAP53621 RPL23AP25-201ENST00000430973 463 ntBASIC4.47□□□□□ -1.69
COPAP53621 MUPP-201ENST00000438111 566 ntBASIC4.47□□□□□ -1.69
COPAP53621 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.47□□□□□ -1.69
COPAP53621 USP9YP29-201ENST00000445112 563 ntBASIC4.47□□□□□ -1.69
COPAP53621 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 AC104563.1-201ENST00000476147 376 ntBASIC4.47□□□□□ -1.69
COPAP53621 AC025445.1-201ENST00000502728 300 ntBASIC4.47□□□□□ -1.69
COPAP53621 AC079140.3-201ENST00000511111 550 ntBASIC4.47□□□□□ -1.69
COPAP53621 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COPAP53621 AC025881.1-201ENST00000518851 512 ntBASIC4.47□□□□□ -1.69
COPAP53621 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 AP003730.1-201ENST00000524605 285 ntBASIC4.47□□□□□ -1.69
COPAP53621 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 AP004242.1-201ENST00000533701 349 ntBASIC4.47□□□□□ -1.69
COPAP53621 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.47□□□□□ -1.69
COPAP53621 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.47□□□□□ -1.69
COPAP53621 AC006270.2-201ENST00000578523 652 ntBASIC4.47□□□□□ -1.69
COPAP53621 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.47□□□□□ -1.69
COPAP53621 MIR544B-201ENST00000582372 78 ntBASIC4.47□□□□□ -1.69
COPAP53621 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.47□□□□□ -1.69
COPAP53621 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.47□□□□□ -1.69
COPAP53621 AC012065.4-201ENST00000602445 679 ntBASIC4.47□□□□□ -1.69
COPAP53621 AL020997.2-201ENST00000602607 184 ntBASIC4.47□□□□□ -1.69
COPAP53621 AC078795.2-201ENST00000602835 1252 ntBASIC4.47□□□□□ -1.69
COPAP53621 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.47□□□□□ -1.69
COPAP53621 AC100793.4-201ENST00000613683 429 ntBASIC4.47□□□□□ -1.69
COPAP53621 ZYXP1-201ENST00000617638 118 ntBASIC4.47□□□□□ -1.69
COPAP53621 AC091905.2-201ENST00000623143 306 ntBASIC4.47□□□□□ -1.69
COPAP53621 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
COPAP53621 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.47□□□□□ -1.69
COPAP53621 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COPAP53621 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COPAP53621 MTCO1P24-201ENST00000515438 1558 ntBASIC4.47□□□□□ -1.69
COPAP53621 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COPAP53621 AC090337.1-201ENST00000579651 2074 ntBASIC4.47□□□□□ -1.69
COPAP53621 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
COPAP53621 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COPAP53621 IQCB2P-201ENST00000401788 1633 ntBASIC4.46□□□□□ -1.69
COPAP53621 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
COPAP53621 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.46□□□□□ -1.69
COPAP53621 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.46□□□□□ -1.7
COPAP53621 MIR93-201ENST00000385024 80 ntBASIC4.46□□□□□ -1.7
COPAP53621 SNORA57.1-201ENST00000391227 145 ntBASIC4.46□□□□□ -1.7
COPAP53621 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COPAP53621 SNORA11F-201ENST00000408237 128 ntBASIC4.46□□□□□ -1.7
COPAP53621 MIR1305-201ENST00000408300 86 ntBASIC4.46□□□□□ -1.7
COPAP53621 RN7SKP263-201ENST00000411194 309 ntBASIC4.46□□□□□ -1.7
COPAP53621 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.46□□□□□ -1.7
COPAP53621 AC007899.1-201ENST00000412776 775 ntBASIC4.46□□□□□ -1.7
COPAP53621 CDK8P2-201ENST00000415020 547 ntBASIC4.46□□□□□ -1.7
COPAP53621 OFD1P18Y-201ENST00000420889 959 ntBASIC4.46□□□□□ -1.7
COPAP53621 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.46□□□□□ -1.7
COPAP53621 AL590233.1-201ENST00000430017 456 ntBASIC4.46□□□□□ -1.7
COPAP53621 USP9YP28-201ENST00000435142 589 ntBASIC4.46□□□□□ -1.7
COPAP53621 RPL37P21-201ENST00000435890 276 ntBASIC4.46□□□□□ -1.7
COPAP53621 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.46□□□□□ -1.7
COPAP53621 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.46□□□□□ -1.7
COPAP53621 AC092641.1-201ENST00000440229 772 ntBASIC4.46□□□□□ -1.7
COPAP53621 RPL23AP33-201ENST00000442301 452 ntBASIC4.46□□□□□ -1.7
COPAP53621 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.46□□□□□ -1.7
COPAP53621 SSXP1-201ENST00000453640 473 ntBASIC4.46□□□□□ -1.7
COPAP53621 HMGB1P15-201ENST00000453854 435 ntBASIC4.46□□□□□ -1.7
COPAP53621 SUMO2P2-201ENST00000456482 255 ntBASIC4.46□□□□□ -1.7
COPAP53621 OR6K1P-201ENST00000456766 971 ntBASIC4.46□□□□□ -1.7
COPAP53621 RPS27AP17-201ENST00000463344 455 ntBASIC4.46□□□□□ -1.7
COPAP53621 AP000797.1-201ENST00000478870 387 ntBASIC4.46□□□□□ -1.7
COPAP53621 TMED11P-201ENST00000479478 690 ntBASIC4.46□□□□□ -1.7
COPAP53621 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.46□□□□□ -1.7
COPAP53621 OR5H5P-201ENST00000503164 928 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms