Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.49□□□□□ -1.69
NEK3P51956 RN7SKP122-201ENST00000515923 296 ntBASIC4.49□□□□□ -1.69
NEK3P51956 RNU6-1003P-201ENST00000517099 105 ntBASIC4.49□□□□□ -1.69
NEK3P51956 IFITM8P-201ENST00000522529 394 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.49□□□□□ -1.69
NEK3P51956 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.49□□□□□ -1.69
NEK3P51956 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.49□□□□□ -1.69
NEK3P51956 AC034268.2-201ENST00000571784 482 ntBASIC4.49□□□□□ -1.69
NEK3P51956 ROCK1P1-201ENST00000573767 549 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.49□□□□□ -1.69
NEK3P51956 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.49□□□□□ -1.69
NEK3P51956 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.49□□□□□ -1.69
NEK3P51956 AC110760.3-201ENST00000598794 467 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC007687.1-201ENST00000602704 304 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AL139286.1-201ENST00000604465 483 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC091965.4-201ENST00000607691 587 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AL590240.3-201ENST00000621416 943 ntBASIC4.49□□□□□ -1.69
NEK3P51956 AC093591.3-201ENST00000634516 308 ntBASIC4.49□□□□□ -1.69
NEK3P51956 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NEK3P51956 CCT4P2-201ENST00000233836 1548 ntBASIC4.49□□□□□ -1.69
NEK3P51956 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NEK3P51956 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NEK3P51956 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NEK3P51956 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NEK3P51956 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NEK3P51956 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
NEK3P51956 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.49□□□□□ -1.69
NEK3P51956 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NEK3P51956 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
NEK3P51956 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.48□□□□□ -1.69
NEK3P51956 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.48□□□□□ -1.69
NEK3P51956 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
NEK3P51956 ELL2P3-201ENST00000457883 1602 ntBASIC4.48□□□□□ -1.69
NEK3P51956 OR5P1P-201ENST00000299512 925 ntBASIC4.48□□□□□ -1.69
NEK3P51956 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
NEK3P51956 SNORD74.4-201ENST00000364129 80 ntBASIC4.48□□□□□ -1.69
NEK3P51956 RNU6-173P-201ENST00000364215 104 ntBASIC4.48□□□□□ -1.69
NEK3P51956 RNU6-1078P-201ENST00000364522 103 ntBASIC4.48□□□□□ -1.69
NEK3P51956 RNU4-91P-201ENST00000364778 135 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AC068538.1-201ENST00000376856 336 ntBASIC4.48□□□□□ -1.69
NEK3P51956 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NEK3P51956 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.48□□□□□ -1.69
NEK3P51956 AL021407.1-201ENST00000404531 386 ntBASIC4.48□□□□□ -1.69
NEK3P51956 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.48□□□□□ -1.69
NEK3P51956 RNU2-71P-201ENST00000411395 189 ntBASIC4.48□□□□□ -1.69
NEK3P51956 SNRPFP1-201ENST00000414761 252 ntBASIC4.48□□□□□ -1.69
NEK3P51956 HSFY4P-201ENST00000415994 1181 ntBASIC4.48□□□□□ -1.69
NEK3P51956 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.48□□□□□ -1.69
NEK3P51956 RPEP2-201ENST00000432149 701 ntBASIC4.48□□□□□ -1.69
NEK3P51956 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.48□□□□□ -1.69
NEK3P51956 VDAC1P3-201ENST00000434069 851 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AC129850.1-201ENST00000436203 508 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.48□□□□□ -1.69
NEK3P51956 MTND2P4-201ENST00000445034 1004 ntBASIC4.48□□□□□ -1.69
NEK3P51956 RPS17P13-201ENST00000448974 407 ntBASIC4.48□□□□□ -1.69
NEK3P51956 RPS27AP17-201ENST00000463344 455 ntBASIC4.48□□□□□ -1.69
NEK3P51956 RN7SL303P-201ENST00000469773 251 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AC109327.1-201ENST00000471666 403 ntBASIC4.48□□□□□ -1.69
NEK3P51956 RPL23AP41-201ENST00000484754 458 ntBASIC4.48□□□□□ -1.69
NEK3P51956 MLLT10P2-201ENST00000506434 249 ntBASIC4.48□□□□□ -1.69
NEK3P51956 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.48□□□□□ -1.69
NEK3P51956 MTCO1P49-201ENST00000523429 802 ntBASIC4.48□□□□□ -1.69
NEK3P51956 HIGD1AP10-201ENST00000527837 282 ntBASIC4.48□□□□□ -1.69
NEK3P51956 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.48□□□□□ -1.69
NEK3P51956 AC135001.1-201ENST00000544546 283 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.48□□□□□ -1.69
NEK3P51956 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.48□□□□□ -1.69
NEK3P51956 GTF2IP22-201ENST00000554443 182 ntBASIC4.48□□□□□ -1.69
NEK3P51956 CYP4A43P-201ENST00000568156 121 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AC023575.1-201ENST00000580510 358 ntBASIC4.48□□□□□ -1.69
NEK3P51956 PIGPP4-201ENST00000584447 307 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.48□□□□□ -1.69
NEK3P51956 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.48□□□□□ -1.69
NEK3P51956 AC010620.1-201ENST00000601088 1102 ntBASIC4.48□□□□□ -1.69
NEK3P51956 Z94722.1-201ENST00000604328 474 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AL160290.3-201ENST00000604869 165 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AC092653.1-201ENST00000608509 531 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AC004825.2-201ENST00000616634 455 ntBASIC4.48□□□□□ -1.69
NEK3P51956 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.48□□□□□ -1.69
NEK3P51956 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AC007546.2-201ENST00000623996 360 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AL356121.2-201ENST00000624715 780 ntBASIC4.48□□□□□ -1.69
NEK3P51956 MIR6830-201ENST00000636015 70 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AC244258.1-201ENST00000637553 1071 ntBASIC4.48□□□□□ -1.69
NEK3P51956 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.48□□□□□ -1.69
NEK3P51956 MTND4P4-201ENST00000439033 1366 ntBASIC4.48□□□□□ -1.69
NEK3P51956 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NEK3P51956 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.48□□□□□ -1.69
NEK3P51956 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms