Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA1P49639 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA1P49639 RNA5SP269-201ENST00000459032 137 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 RPL7P16-201ENST00000479738 738 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 FAM172BP-201ENST00000487497 1089 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 NDUFB5P1-201ENST00000508134 564 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC010342.1-201ENST00000514047 877 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXA1P49639 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC022861.1-201ENST00000522981 663 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AP001922.4-201ENST00000526967 290 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 PTP4A1P6-201ENST00000531034 478 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA1P49639 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXA1P49639 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA1P49639 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA1P49639 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA1P49639 MIR4307-201ENST00000582802 84 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA1P49639 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA1P49639 AC067852.4-201ENST00000590314 478 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC022916.3-201ENST00000592961 742 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 SEPT7P9-203ENST00000604116 343 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AL021997.1-201ENST00000605757 193 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC006566.1-201ENST00000608943 513 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC104010.1-201ENST00000616889 150 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HOXA1P49639 AC068792.1-201ENST00000621354 417 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AL590240.3-201ENST00000621416 943 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC008785.1-201ENST00000624475 456 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 AC006065.6-201ENST00000625201 545 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXA1P49639 AL392088.2-201ENST00000637607 285 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA1P49639 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
HOXA1P49639 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA1P49639 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA1P49639 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA1P49639 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA1P49639 LINC00561-201ENST00000565815 2738 ntBASIC3.55□□□□□ -1.84
HOXA1P49639 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA1P49639 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXA1P49639 TEX21P-201ENST00000447107 1476 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 ZNF826P-207ENST00000622273 1910 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXA1P49639 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXA1P49639 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA1P49639 AL122126.1-201ENST00000546905 1318 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AC021146.4-201ENST00000309229 279 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXA1P49639 Y_RNA.3-201ENST00000362331 103 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 RNU1-18P-201ENST00000363062 164 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 SNORA51.8-201ENST00000384234 132 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 RNU6-297P-201ENST00000384636 107 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 RNU2-16P-201ENST00000410712 136 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AIMP1P1-201ENST00000418670 937 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 RPL31P45-201ENST00000419532 356 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 FNDC3CP-201ENST00000420795 1155 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 AL049745.1-201ENST00000433953 286 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 RPL37P21-201ENST00000435890 276 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXA1P49639 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AC091685.2-201ENST00000454924 864 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA1P49639 MTCO1P42-201ENST00000457379 726 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 AC004801.2-202ENST00000463559 283 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AC022034.3-201ENST00000471393 478 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 BTF3L4P4-201ENST00000506381 449 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 ARL2BPP4-201ENST00000506854 471 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 POU5F1P7-201ENST00000508759 541 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 MTCO3P44-201ENST00000510977 541 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA1P49639 AC093677.1-201ENST00000514414 678 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 HIGD1AP3-201ENST00000515857 278 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 RNA5SP216-201ENST00000516111 123 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXA1P49639 COX6CP8-201ENST00000522620 226 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXA1P49639 MTND4LP18-201ENST00000526864 291 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 PHBP17-201ENST00000528576 541 ntBASIC3.54□□□□□ -1.84
HOXA1P49639 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXA1P49639 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXA1P49639 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA1P49639 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
HOXA1P49639 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXA1P49639 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXA1P49639 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA1P49639 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms