Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC026412.2-201ENST00000512270 1075 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 RPL12P22-201ENST00000519073 490 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 NDUFA5P2-201ENST00000519723 344 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.75□□□□□ -1.81
HNF4AP41235 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.75□□□□□ -1.81
HNF4AP41235 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HNF4AP41235 SNRPGP16-201ENST00000533275 226 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HNF4AP41235 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.75□□□□□ -1.81
HNF4AP41235 ZNF321P-202ENST00000550843 495 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.75□□□□□ -1.81
HNF4AP41235 DUXAP6-201ENST00000553858 601 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.75□□□□□ -1.81
HNF4AP41235 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.75□□□□□ -1.81
HNF4AP41235 MIR5708-201ENST00000579723 85 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.75□□□□□ -1.81
HNF4AP41235 AC015726.1-201ENST00000602353 681 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AL109653.1-201ENST00000603091 248 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC012669.1-201ENST00000603209 283 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC097478.2-201ENST00000610572 514 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 AC024257.5-201ENST00000612739 531 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.75□□□□□ -1.81
HNF4AP41235 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.75□□□□□ -1.81
HNF4AP41235 AC073530.2-201ENST00000623987 261 ntBASIC3.75□□□□□ -1.81
HNF4AP41235 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.75□□□□□ -1.81
HNF4AP41235 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.75□□□□□ -1.81
HNF4AP41235 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HNF4AP41235 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
HNF4AP41235 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HNF4AP41235 SNORD116.1-201ENST00000365628 92 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 ARF4P3-201ENST00000397387 509 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC119751.3-201ENST00000399720 670 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 HMGB1P49-201ENST00000418882 569 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 OR8F1P-201ENST00000425243 930 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.74□□□□□ -1.81
HNF4AP41235 SEPT7P5-201ENST00000434048 306 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 RABEPKP1-201ENST00000440529 1026 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 VN1R10P-201ENST00000447106 875 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.74□□□□□ -1.81
HNF4AP41235 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 BTF3P5-201ENST00000457252 467 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.74□□□□□ -1.81
HNF4AP41235 AC004263.1-201ENST00000479327 332 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 BTF3L4P4-201ENST00000506381 449 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.74□□□□□ -1.81
HNF4AP41235 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.74□□□□□ -1.81
HNF4AP41235 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 OR8R1P-201ENST00000543943 764 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.74□□□□□ -1.81
HNF4AP41235 AC010198.2-201ENST00000550612 259 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AL391156.1-201ENST00000554965 554 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC090877.1-201ENST00000561418 344 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.74□□□□□ -1.81
HNF4AP41235 VN1R83P-201ENST00000595685 445 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.74□□□□□ -1.81
HNF4AP41235 DUXAP3-201ENST00000603616 594 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AP001330.4-201ENST00000604350 154 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC007349.4-201ENST00000608114 532 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AP001521.1-201ENST00000609150 300 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.74□□□□□ -1.81
HNF4AP41235 AC091304.6-201ENST00000619761 202 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AP002782.1-201ENST00000623107 614 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 OR1S1-201ENST00000624470 978 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 AC017037.3-201ENST00000625016 472 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.74□□□□□ -1.81
HNF4AP41235 AC244205.2-202ENST00000635781 342 ntBASIC3.74□□□□□ -1.81
HNF4AP41235 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HNF4AP41235 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.74□□□□□ -1.81
HNF4AP41235 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.74□□□□□ -1.81
HNF4AP41235 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.74□□□□□ -1.81
HNF4AP41235 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HNF4AP41235 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HNF4AP41235 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.73□□□□□ -1.81
HNF4AP41235 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.73□□□□□ -1.81
HNF4AP41235 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HNF4AP41235 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HNF4AP41235 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.73□□□□□ -1.81
HNF4AP41235 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HNF4AP41235 SNORA40.2-201ENST00000390847 128 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.73□□□□□ -1.81
HNF4AP41235 ERHP2-201ENST00000402323 299 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 AL008987.1-201ENST00000415528 237 ntBASIC3.73□□□□□ -1.81
HNF4AP41235 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.73□□□□□ -1.81
HNF4AP41235 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.73□□□□□ -1.81
HNF4AP41235 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms