Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.17□□□□□ -1.9
RORAP35398 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.17□□□□□ -1.9
RORAP35398 MTCO1P40-201ENST00000574371 625 ntBASIC3.17□□□□□ -1.9
RORAP35398 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 AC022069.1-201ENST00000582910 658 ntBASIC3.17□□□□□ -1.9
RORAP35398 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.17□□□□□ -1.9
RORAP35398 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.17□□□□□ -1.9
RORAP35398 AC103881.1-201ENST00000603476 538 ntBASIC3.17□□□□□ -1.9
RORAP35398 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
RORAP35398 AL160281.1-201ENST00000605307 311 ntBASIC3.17□□□□□ -1.9
RORAP35398 AC005000.2-201ENST00000605468 310 ntBASIC3.17□□□□□ -1.9
RORAP35398 AC068831.7-201ENST00000616954 363 ntBASIC3.17□□□□□ -1.9
RORAP35398 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
RORAP35398 CR383658.2-201ENST00000547576 1525 ntBASIC3.17□□□□□ -1.9
RORAP35398 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RORAP35398 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.16□□□□□ -1.9
RORAP35398 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RORAP35398 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.16□□□□□ -1.9
RORAP35398 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 ZNF734P-201ENST00000419494 1534 ntBASIC3.16□□□□□ -1.9
RORAP35398 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 RNU6-354P-201ENST00000383862 107 ntBASIC3.16□□□□□ -1.9
RORAP35398 RNU6-610P-201ENST00000384264 107 ntBASIC3.16□□□□□ -1.9
RORAP35398 RNU6-932P-201ENST00000391108 106 ntBASIC3.16□□□□□ -1.9
RORAP35398 RPS3AP26-201ENST00000398259 784 ntBASIC3.16□□□□□ -1.9
RORAP35398 AL357075.1-201ENST00000404107 726 ntBASIC3.16□□□□□ -1.9
RORAP35398 AC126124.2-201ENST00000413542 321 ntBASIC3.16□□□□□ -1.9
RORAP35398 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.16□□□□□ -1.9
RORAP35398 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.16□□□□□ -1.9
RORAP35398 AC246680.2-201ENST00000422106 389 ntBASIC3.16□□□□□ -1.9
RORAP35398 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 AC002542.1-201ENST00000440683 193 ntBASIC3.16□□□□□ -1.9
RORAP35398 ATP5C1P1-201ENST00000441945 895 ntBASIC3.16□□□□□ -1.9
RORAP35398 HSPE1P28-201ENST00000443139 211 ntBASIC3.16□□□□□ -1.9
RORAP35398 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.16□□□□□ -1.9
RORAP35398 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.16□□□□□ -1.9
RORAP35398 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.16□□□□□ -1.9
RORAP35398 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.16□□□□□ -1.9
RORAP35398 snoU13.4-201ENST00000458916 104 ntBASIC3.16□□□□□ -1.9
RORAP35398 snoU13.3-201ENST00000459441 104 ntBASIC3.16□□□□□ -1.9
RORAP35398 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.16□□□□□ -1.9
RORAP35398 RPS23P3-201ENST00000470993 430 ntBASIC3.16□□□□□ -1.9
RORAP35398 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.16□□□□□ -1.9
RORAP35398 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
RORAP35398 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.16□□□□□ -1.9
RORAP35398 APOOP4-201ENST00000513530 597 ntBASIC3.16□□□□□ -1.9
RORAP35398 SNORD59.2-201ENST00000516873 68 ntBASIC3.16□□□□□ -1.9
RORAP35398 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.16□□□□□ -1.9
RORAP35398 IGKV2D-36-201ENST00000518643 226 ntBASIC3.16□□□□□ -1.9
RORAP35398 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 AC113192.3-201ENST00000529152 742 ntBASIC3.16□□□□□ -1.9
RORAP35398 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.16□□□□□ -1.9
RORAP35398 AL136520.1-202ENST00000555494 763 ntBASIC3.16□□□□□ -1.9
RORAP35398 GTF2IP8-201ENST00000560687 584 ntBASIC3.16□□□□□ -1.9
RORAP35398 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.16□□□□□ -1.9
RORAP35398 MTCO3P24-201ENST00000572729 782 ntBASIC3.16□□□□□ -1.9
RORAP35398 MIR4789-201ENST00000577469 82 ntBASIC3.16□□□□□ -1.9
RORAP35398 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
RORAP35398 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.16□□□□□ -1.9
RORAP35398 AC113368.1-201ENST00000603736 382 ntBASIC3.16□□□□□ -1.9
RORAP35398 AC073657.2-201ENST00000605661 303 ntBASIC3.16□□□□□ -1.9
RORAP35398 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.16□□□□□ -1.9
RORAP35398 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.16□□□□□ -1.9
RORAP35398 AL356321.1-201ENST00000621360 228 ntBASIC3.16□□□□□ -1.9
RORAP35398 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
RORAP35398 AC106730.3-201ENST00000624568 641 ntBASIC3.16□□□□□ -1.9
RORAP35398 MAPK10-362ENST00000641864 4484 ntBASIC3.16□□□□□ -1.9
RORAP35398 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RORAP35398 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.16□□□□□ -1.9
RORAP35398 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RORAP35398 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RORAP35398 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RORAP35398 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RORAP35398 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RORAP35398 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RORAP35398 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
RORAP35398 Y_RNA.493-201ENST00000384422 102 ntBASIC3.15□□□□□ -1.91
RORAP35398 RPL31P1-201ENST00000398116 372 ntBASIC3.15□□□□□ -1.91
RORAP35398 RNU4-78P-201ENST00000410940 126 ntBASIC3.15□□□□□ -1.91
RORAP35398 Z92545.1-201ENST00000411782 234 ntBASIC3.15□□□□□ -1.91
RORAP35398 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.15□□□□□ -1.91
RORAP35398 RPL23AP22-201ENST00000437556 453 ntBASIC3.15□□□□□ -1.91
RORAP35398 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.15□□□□□ -1.91
RORAP35398 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.15□□□□□ -1.91
RORAP35398 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.15□□□□□ -1.91
RORAP35398 RPL7P5-201ENST00000471472 736 ntBASIC3.15□□□□□ -1.91
RORAP35398 AC021205.2-201ENST00000480069 347 ntBASIC3.15□□□□□ -1.91
RORAP35398 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.15□□□□□ -1.91
RORAP35398 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.15□□□□□ -1.91
RORAP35398 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms