Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CKS2P33552 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CKS2P33552 AL672167.1-206ENST00000356293 943 ntBASIC1.92□□□□□ -2.1
CKS2P33552 RNU6-263P-201ENST00000363811 107 ntBASIC1.92□□□□□ -2.1
CKS2P33552 RNU6-1243P-201ENST00000364028 107 ntBASIC1.92□□□□□ -2.1
CKS2P33552 RNU6-1180P-201ENST00000364935 107 ntBASIC1.92□□□□□ -2.1
CKS2P33552 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CKS2P33552 SNORA57.1-201ENST00000391227 145 ntBASIC1.92□□□□□ -2.1
CKS2P33552 AC025750.1-201ENST00000399891 379 ntBASIC1.92□□□□□ -2.1
CKS2P33552 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CKS2P33552 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 AL160175.1-201ENST00000428124 247 ntBASIC1.92□□□□□ -2.1
CKS2P33552 AC091286.1-201ENST00000431233 461 ntBASIC1.92□□□□□ -2.1
CKS2P33552 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 RPL34P26-201ENST00000445636 354 ntBASIC1.92□□□□□ -2.1
CKS2P33552 NUTF2P7-201ENST00000453086 375 ntBASIC1.92□□□□□ -2.1
CKS2P33552 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 BTF3P5-201ENST00000457252 467 ntBASIC1.92□□□□□ -2.1
CKS2P33552 RNA5SP310-201ENST00000459084 116 ntBASIC1.92□□□□□ -2.1
CKS2P33552 AP002812.1-201ENST00000495378 474 ntBASIC1.92□□□□□ -2.1
CKS2P33552 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CKS2P33552 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC1.92□□□□□ -2.1
CKS2P33552 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 MTND3P24-201ENST00000506306 329 ntBASIC1.92□□□□□ -2.1
CKS2P33552 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CKS2P33552 AC010625.1-201ENST00000511296 403 ntBASIC1.92□□□□□ -2.1
CKS2P33552 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.92□□□□□ -2.1
CKS2P33552 RNA5SP367-201ENST00000516557 118 ntBASIC1.92□□□□□ -2.1
CKS2P33552 IGKV2D-36-201ENST00000518643 226 ntBASIC1.92□□□□□ -2.1
CKS2P33552 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.92□□□□□ -2.1
CKS2P33552 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC1.92□□□□□ -2.1
CKS2P33552 AC093014.1-201ENST00000548926 724 ntBASIC1.92□□□□□ -2.1
CKS2P33552 H3F3AP1-201ENST00000559984 334 ntBASIC1.92□□□□□ -2.1
CKS2P33552 MIR5194-201ENST00000582634 120 ntBASIC1.92□□□□□ -2.1
CKS2P33552 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 AC010620.2-201ENST00000600135 313 ntBASIC1.92□□□□□ -2.1
CKS2P33552 AC106791.2-201ENST00000604680 391 ntBASIC1.92□□□□□ -2.1
CKS2P33552 AP004372.1-201ENST00000604842 844 ntBASIC1.92□□□□□ -2.1
CKS2P33552 AC135178.6-201ENST00000605314 398 ntBASIC1.92□□□□□ -2.1
CKS2P33552 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC1.92□□□□□ -2.1
CKS2P33552 AC009570.1-201ENST00000609599 745 ntBASIC1.92□□□□□ -2.1
CKS2P33552 AP005212.4-201ENST00000614206 710 ntBASIC1.92□□□□□ -2.1
CKS2P33552 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.92□□□□□ -2.1
CKS2P33552 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CKS2P33552 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
CKS2P33552 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.92□□□□□ -2.1
CKS2P33552 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKS2P33552 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKS2P33552 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKS2P33552 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKS2P33552 U8.8-201ENST00000365399 135 ntBASIC1.91□□□□□ -2.1
CKS2P33552 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKS2P33552 RNU6-837P-201ENST00000391056 108 ntBASIC1.91□□□□□ -2.1
CKS2P33552 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CKS2P33552 PRRC2CP1-201ENST00000404428 159 ntBASIC1.91□□□□□ -2.1
CKS2P33552 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS2P33552 RPL7P37-201ENST00000425095 738 ntBASIC1.91□□□□□ -2.1
CKS2P33552 EIF2S2P3-201ENST00000428356 999 ntBASIC1.91□□□□□ -2.1
CKS2P33552 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS2P33552 CDC27P1-201ENST00000445384 715 ntBASIC1.91□□□□□ -2.1
CKS2P33552 PDSS1P2-201ENST00000449397 678 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS2P33552 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.91□□□□□ -2.1
CKS2P33552 C1DP3-201ENST00000455013 423 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AL109741.2-201ENST00000455561 343 ntBASIC1.91□□□□□ -2.1
CKS2P33552 RPL23AP31-201ENST00000456160 467 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS2P33552 AC090543.1-201ENST00000492168 485 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AC021087.2-201ENST00000504656 1203 ntBASIC1.91□□□□□ -2.1
CKS2P33552 CDC42P4-201ENST00000510507 563 ntBASIC1.91□□□□□ -2.1
CKS2P33552 RAC1P5-201ENST00000512182 576 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS2P33552 AC025881.1-201ENST00000518851 512 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS2P33552 PSMA2P1-201ENST00000526365 646 ntBASIC1.91□□□□□ -2.1
CKS2P33552 EIF4EP5-201ENST00000528228 640 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AP002404.1-201ENST00000532005 451 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS2P33552 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS2P33552 AL049870.4-201ENST00000555741 486 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.91□□□□□ -2.1
CKS2P33552 AC009163.5-201ENST00000575421 637 ntBASIC1.91□□□□□ -2.1
CKS2P33552 GLUD1P4-201ENST00000590914 418 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS2P33552 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS2P33552 AC024153.1-201ENST00000603103 365 ntBASIC1.91□□□□□ -2.1
CKS2P33552 RPL12P50-201ENST00000603116 116 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AC119501.1-201ENST00000603646 475 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AL137843.1-201ENST00000605078 385 ntBASIC1.91□□□□□ -2.1
CKS2P33552 HNRNPDLP4-201ENST00000605144 301 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AC135803.1-201ENST00000608748 565 ntBASIC1.91□□□□□ -2.1
CKS2P33552 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.91□□□□□ -2.1
CKS2P33552 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS2P33552 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CKS2P33552 AC095031.1-201ENST00000623685 672 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms