Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNGA1P29973 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNGA1P29973 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNGA1P29973 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNGA1P29973 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CNGA1P29973 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.12□□□□□ -1.59
CNGA1P29973 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CNGA1P29973 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 RN7SKP280-201ENST00000364196 304 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CNGA1P29973 SNORA40.3-201ENST00000390964 122 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 SDHCP2-201ENST00000398565 501 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 RPS20P2-201ENST00000402520 389 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 RNU6-248P-201ENST00000410720 107 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.11□□□□□ -1.59
CNGA1P29973 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.11□□□□□ -1.59
CNGA1P29973 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.11□□□□□ -1.59
CNGA1P29973 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.11□□□□□ -1.59
CNGA1P29973 HSFY6P-201ENST00000445573 403 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 AC104651.2-201ENST00000447549 528 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.11□□□□□ -1.59
CNGA1P29973 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.11□□□□□ -1.59
CNGA1P29973 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.11□□□□□ -1.59
CNGA1P29973 AC113430.1-201ENST00000506872 718 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 AC108475.1-201ENST00000507880 950 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 RNU6-405P-201ENST00000516637 110 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.11□□□□□ -1.59
CNGA1P29973 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 AC112230.1-201ENST00000604342 547 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 AC092354.2-201ENST00000607786 514 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 AC131902.3-201ENST00000611767 581 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 AC108479.2-201ENST00000617314 601 ntBASIC5.11□□□□□ -1.59
CNGA1P29973 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.11□□□□□ -1.59
CNGA1P29973 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.11□□□□□ -1.59
CNGA1P29973 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.11□□□□□ -1.59
CNGA1P29973 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CNGA1P29973 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNGA1P29973 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CNGA1P29973 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CNGA1P29973 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNGA1P29973 RNU6-97P-201ENST00000363387 104 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 RNU1-132P-201ENST00000364300 164 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNGA1P29973 Y_RNA.548-201ENST00000384656 105 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 RPL7P25-201ENST00000404151 721 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNGA1P29973 USP9YP13-201ENST00000417797 480 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AL451062.2-201ENST00000427515 271 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 BX890604.2-201ENST00000427883 474 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AC108734.1-201ENST00000439549 399 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 PGBD4P3-201ENST00000440731 581 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 MTND1P27-201ENST00000451117 902 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AL033528.1-201ENST00000453780 140 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AC104308.1-201ENST00000454621 333 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AC021382.1-201ENST00000483523 359 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AC041039.1-201ENST00000485656 536 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AC108145.1-201ENST00000503770 153 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.1□□□□□ -1.59
CNGA1P29973 AC006390.1-201ENST00000508068 283 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AF186190.1-201ENST00000517470 480 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 OR4R3P-201ENST00000525084 838 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 OR5M7P-201ENST00000526140 972 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AP003497.1-201ENST00000528472 562 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.1□□□□□ -1.59
CNGA1P29973 AC022880.1-201ENST00000534017 973 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.1□□□□□ -1.59
CNGA1P29973 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.1□□□□□ -1.59
CNGA1P29973 AC138932.5-201ENST00000617759 563 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AL359715.5-201ENST00000623431 443 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AC074029.4-201ENST00000624796 1859 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 AC099654.13-201ENST00000639774 207 ntBASIC5.1□□□□□ -1.59
CNGA1P29973 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNGA1P29973 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CNGA1P29973 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.09□□□□□ -1.59
CNGA1P29973 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNGA1P29973 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNGA1P29973 OR5P1P-201ENST00000299512 925 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CNGA1P29973 Y_RNA.46-201ENST00000362695 102 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 RNU1-83P-201ENST00000363426 164 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 AL359704.1-201ENST00000411586 781 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.09□□□□□ -1.59
CNGA1P29973 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.09□□□□□ -1.59
CNGA1P29973 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.09□□□□□ -1.59
CNGA1P29973 RPS20P32-201ENST00000456044 356 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 AP1S2P1-201ENST00000457344 379 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 LARP1BP2-201ENST00000486594 519 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 AC109464.2-201ENST00000510242 943 ntBASIC5.09□□□□□ -1.59
CNGA1P29973 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.09□□□□□ -1.59
CNGA1P29973 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.09□□□□□ -1.59
CNGA1P29973 MIR4528-201ENST00000577763 90 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms