Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN6P29350 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN6P29350 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN6P29350 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN6P29350 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN6P29350 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN6P29350 SNORA73.2-201ENST00000364946 201 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN6P29350 SNORA5A-201ENST00000384111 134 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 MIR620-201ENST00000385232 95 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC016769.3-201ENST00000396562 315 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 RNA5SP44-201ENST00000410446 133 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN6P29350 AL035423.1-201ENST00000420331 213 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN6P29350 RPF2P1-201ENST00000424137 906 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 GTF2IP3-201ENST00000433887 494 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN6P29350 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 PNPLA4P1-201ENST00000458328 305 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 RN7SL594P-201ENST00000470590 287 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 MTND3P3-201ENST00000505004 126 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC110768.1-201ENST00000509222 400 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC105914.1-201ENST00000511798 226 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN6P29350 RN7SKP60-201ENST00000516985 239 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN6P29350 AP001636.2-201ENST00000525517 696 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.37□□□□□ -1.87
PTPN6P29350 AC011602.1-201ENST00000546484 331 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 DUXAP6-201ENST00000553858 601 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 GTF2IP22-201ENST00000554443 182 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 TGIF1P1-201ENST00000558095 802 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 GTF2IP8-201ENST00000560687 584 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 MIR3186-201ENST00000577404 85 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 AL035411.2-201ENST00000604022 421 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AL158050.2-201ENST00000605336 568 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC024060.1-201ENST00000607052 494 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC009237.15-201ENST00000610252 501 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AL590240.3-201ENST00000621416 943 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 AC104985.3-201ENST00000623479 597 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN6P29350 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN6P29350 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN6P29350 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN6P29350 GDI2P1-201ENST00000429312 1336 ntBASIC3.37□□□□□ -1.87
PTPN6P29350 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN6P29350 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN6P29350 MFSD8-236ENST00000641509 4050 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PTPN6P29350 NUP58P1-201ENST00000502546 1738 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 AP005901.5-201ENST00000545779 1796 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PTPN6P29350 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 SNORA71.3-201ENST00000362582 128 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 RNA5SP51-201ENST00000364750 119 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPN6P29350 RNU6-1176P-201ENST00000390955 107 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AL591034.1-201ENST00000407447 340 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PTPN6P29350 RN7SKP285-201ENST00000410137 318 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 RNU6-55P-201ENST00000411092 107 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 RN7SKP53-201ENST00000411337 315 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 RNU6-954P-201ENST00000411355 107 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC068533.1-201ENST00000418542 415 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC069157.1-201ENST00000421749 137 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN6P29350 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN6P29350 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN6P29350 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN6P29350 AC010655.1-201ENST00000449336 292 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN6P29350 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC020893.1-201ENST00000502452 580 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN6P29350 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN6P29350 RANP9-201ENST00000519957 271 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPN6P29350 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN6P29350 AL389895.1-201ENST00000554127 252 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN6P29350 AC138915.2-201ENST00000569776 97 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 MIR3944-201ENST00000581277 108 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN6P29350 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms