Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC104763.3-201ENST00000613765 618 ntBASIC3.52□□□□□ -1.85
PTPN4P29074 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTPN4P29074 OR1S1-201ENST00000624470 978 ntBASIC3.52□□□□□ -1.85
PTPN4P29074 U6.105-201ENST00000637379 88 ntBASIC3.52□□□□□ -1.85
PTPN4P29074 AL445984.1-201ENST00000637834 659 ntBASIC3.52□□□□□ -1.85
PTPN4P29074 MTCO1P12-201ENST00000414273 1543 ntBASIC3.52□□□□□ -1.85
PTPN4P29074 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTPN4P29074 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTPN4P29074 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTPN4P29074 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTPN4P29074 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PTPN4P29074 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN4P29074 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN4P29074 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN4P29074 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN4P29074 RNA5SP383-201ENST00000362934 120 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AL583834.1-201ENST00000406943 343 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AL133264.1-201ENST00000407157 562 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 U3.39-201ENST00000408569 239 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PTPN4P29074 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.51□□□□□ -1.85
PTPN4P29074 AC126124.2-201ENST00000413542 321 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 RAD23BP2-201ENST00000416003 1207 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN4P29074 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN4P29074 TOMM22P1-201ENST00000418578 312 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 KRR1P1-201ENST00000419430 803 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN4P29074 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN4P29074 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN4P29074 ARF4P2-201ENST00000430209 526 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN4P29074 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.51□□□□□ -1.85
PTPN4P29074 SLC31A1P1-201ENST00000451221 567 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 HMGB1P15-201ENST00000453854 435 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN4P29074 HMGN1P18-201ENST00000457642 277 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 PNPLA4P1-201ENST00000458328 305 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN4P29074 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN4P29074 RNU1-61P-201ENST00000516107 151 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 SNORA64.4-201ENST00000516632 81 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 SNORA31.20-201ENST00000517111 133 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AC104027.1-201ENST00000521887 300 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN4P29074 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.51□□□□□ -1.85
PTPN4P29074 AC026333.2-201ENST00000542164 106 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 SULT1C2P1-202ENST00000562418 459 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AL845331.3-202ENST00000562856 261 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AC005412.1-201ENST00000580812 1049 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 SNORD84-203ENST00000584275 78 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 MIR3922-201ENST00000585192 84 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AP001029.3-201ENST00000588063 596 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AL161756.2-201ENST00000604597 246 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AL583856.2-201ENST00000606298 543 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 AC011816.2-201ENST00000607089 556 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN4P29074 AC092650.2-201ENST00000619984 902 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.51□□□□□ -1.85
PTPN4P29074 AL353746.1-201ENST00000566293 6881 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN4P29074 AC007656.2-201ENST00000624902 4547 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.51□□□□□ -1.85
PTPN4P29074 AC007823.1-201ENST00000569932 1566 ntBASIC3.51□□□□□ -1.85
PTPN4P29074 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTPN4P29074 AL136164.4-201ENST00000625013 2135 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC007496.3-201ENST00000624987 3443 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN4P29074 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN4P29074 DEFB109C-201ENST00000382575 264 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 DEFB109B-201ENST00000382656 264 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 Y_RNA.578-201ENST00000390903 88 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 RPL7P60-201ENST00000397636 735 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 RNU4-65P-201ENST00000410473 140 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.5□□□□□ -1.85
PTPN4P29074 AC006548.1-201ENST00000427470 102 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 MTCO1P3-201ENST00000429327 192 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 HMGN2P20-201ENST00000437531 273 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.5□□□□□ -1.85
PTPN4P29074 AL357552.1-201ENST00000445254 415 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.5□□□□□ -1.85
PTPN4P29074 CYCSP35-201ENST00000451978 304 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN4P29074 AP000563.1-201ENST00000490865 758 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.5□□□□□ -1.85
PTPN4P29074 OR5H5P-201ENST00000503164 928 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 DYNLL1P6-201ENST00000503440 264 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC114967.1-201ENST00000504890 259 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 RNU6-885P-201ENST00000516607 104 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN4P29074 OR5B10P-201ENST00000532869 642 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.5□□□□□ -1.85
PTPN4P29074 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN4P29074 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.5□□□□□ -1.85
PTPN4P29074 DUXAP6-201ENST00000553858 601 ntBASIC3.5□□□□□ -1.85
PTPN4P29074 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.5□□□□□ -1.85
PTPN4P29074 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.5□□□□□ -1.85
PTPN4P29074 AC020914.6-201ENST00000594327 272 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms