Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-173P-201ENST00000364215 104 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 RNU6-298P-201ENST00000390888 96 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 ATP5F1P3-201ENST00000397213 657 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 RNU2-42P-201ENST00000410697 113 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 RAB9AP3-201ENST00000412737 573 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 HMGB3P23-201ENST00000414981 585 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC245052.5-201ENST00000416320 649 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC127526.1-201ENST00000417526 366 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 RPL21P32-201ENST00000419877 477 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 RPL7P30-201ENST00000420888 709 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 GTF2IP7-202ENST00000436677 309 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 MTCYBP11-201ENST00000447254 1109 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 RAB9AP1-201ENST00000449393 573 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 HMGN2P13-201ENST00000476476 274 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 RN7SKP18-201ENST00000516005 275 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 RNU2-27P-201ENST00000516185 142 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AP001636.2-201ENST00000525517 696 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC022690.1-201ENST00000526681 550 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 LRRC6P1-201ENST00000532188 885 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC141257.3-201ENST00000572906 215 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC020914.6-201ENST00000594327 272 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC245036.5-201ENST00000596330 847 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AL390838.2-201ENST00000602394 274 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC073387.2-201ENST00000604797 784 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC008962.1-201ENST00000605729 304 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC253576.2-201ENST00000618815 580 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AL356585.4-201ENST00000623078 1229 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC012442.3-202ENST00000636742 206 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AC007656.2-201ENST00000624902 4547 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 SNORD9-201ENST00000362566 104 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 SNORA5A-201ENST00000384111 134 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 MIR23B-201ENST00000384832 97 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 GOT2P5-201ENST00000433995 546 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 SNRPEP4-201ENST00000435815 279 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 USP9YP22-201ENST00000438971 294 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC092427.1-201ENST00000439177 601 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AL645638.1-201ENST00000440519 361 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 RPL39P6-201ENST00000448289 150 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 RPL12P26-201ENST00000452430 487 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 Z82190.1-201ENST00000454534 490 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 RPL7L1P8-201ENST00000469911 741 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 RN7SL594P-201ENST00000470590 287 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC069528.1-202ENST00000482888 637 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 RPS3AP50-201ENST00000487064 803 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 CBX3P3-201ENST00000508108 532 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 RNU1-95P-201ENST00000516357 160 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 RNU1-128P-201ENST00000516704 160 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC087808.1-201ENST00000520501 361 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AP001804.3-201ENST00000525146 880 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC024224.1-201ENST00000538284 609 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 MIR3912-201ENST00000577566 105 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 MIR4429-201ENST00000580105 73 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC106900.2-201ENST00000604994 317 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AP000720.1-201ENST00000625091 483 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC119674.1-207ENST00000641355 633 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC107982.1-201ENST00000507171 1300 ntBASIC3.6□□□□□ -1.83
HLA-DPA1P20036 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPA1P20036 AC007823.1-201ENST00000569932 1566 ntBASIC3.59□□□□□ -1.83
HLA-DPA1P20036 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DPA1P20036 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
HLA-DPA1P20036 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DPA1P20036 RNU6-216P-201ENST00000363282 104 ntBASIC3.59□□□□□ -1.83
HLA-DPA1P20036 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DPA1P20036 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DPA1P20036 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.59□□□□□ -1.83
HLA-DPA1P20036 RNU2-47P-201ENST00000410649 186 ntBASIC3.59□□□□□ -1.83
HLA-DPA1P20036 RN7SKP53-201ENST00000411337 315 ntBASIC3.59□□□□□ -1.83
HLA-DPA1P20036 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DPA1P20036 AL137014.1-201ENST00000420490 1226 ntBASIC3.59□□□□□ -1.83
HLA-DPA1P20036 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DPA1P20036 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms