Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RN7SL319P-201ENST00000480656 221 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 RPL36AP51-201ENST00000487216 318 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 MRPS33P2-201ENST00000507850 322 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 AC026801.2-201ENST00000515352 425 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC3P19447 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.85□□□□□ -1.47
ERCC3P19447 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC3P19447 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.85□□□□□ -1.47
ERCC3P19447 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.85□□□□□ -1.47
ERCC3P19447 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.85□□□□□ -1.47
ERCC3P19447 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.85□□□□□ -1.47
ERCC3P19447 AC012409.3-201ENST00000611343 981 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 AP000346.3-201ENST00000622821 210 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 AC006065.5-201ENST00000623427 349 ntBASIC5.85□□□□□ -1.47
ERCC3P19447 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.85□□□□□ -1.47
ERCC3P19447 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC3P19447 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.85□□□□□ -1.47
ERCC3P19447 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.85□□□□□ -1.47
ERCC3P19447 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERCC3P19447 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.85□□□□□ -1.47
ERCC3P19447 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC3P19447 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC3P19447 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
ERCC3P19447 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.84□□□□□ -1.47
ERCC3P19447 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.84□□□□□ -1.47
ERCC3P19447 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC3P19447 RNU6-641P-201ENST00000384006 107 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 RNU6-398P-201ENST00000384143 109 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 RPS4XP8-201ENST00000402039 771 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 RAP1BP3-201ENST00000407180 549 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 RNA5SP107-201ENST00000411358 122 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 BEND7P1-201ENST00000422058 457 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC3P19447 RPS15AP9-201ENST00000439856 381 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.84□□□□□ -1.47
ERCC3P19447 FDX1P2-201ENST00000450769 375 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.84□□□□□ -1.47
ERCC3P19447 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.84□□□□□ -1.47
ERCC3P19447 RPS15AP36-201ENST00000492022 382 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC3P19447 AC010350.1-201ENST00000504908 231 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 RNU2-10P-201ENST00000516375 211 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.84□□□□□ -1.47
ERCC3P19447 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.84□□□□□ -1.47
ERCC3P19447 FAM60DP-201ENST00000524174 632 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 DEFB108D-201ENST00000527787 222 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC3P19447 AC128657.1-201ENST00000549459 145 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.84□□□□□ -1.47
ERCC3P19447 HIF1AP1-201ENST00000553642 175 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.84□□□□□ -1.47
ERCC3P19447 AP001429.1-201ENST00000602568 530 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 HMGN2P28-201ENST00000606102 262 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 AL139811.1-201ENST00000424779 2299 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC3P19447 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ERCC3P19447 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERCC3P19447 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 AC244517.1-201ENST00000606030 2086 ntBASIC5.84□□□□□ -1.47
ERCC3P19447 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.84□□□□□ -1.48
ERCC3P19447 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ERCC3P19447 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC3P19447 SCARNA15-201ENST00000607520 4325 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ERCC3P19447 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC3P19447 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ERCC3P19447 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC3P19447 MFSD8-216ENST00000641147 4009 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC3P19447 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC3P19447 RNA5SP241-201ENST00000391326 114 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 RPS4XP9-201ENST00000405151 780 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC3P19447 MTCO3P12-201ENST00000416718 547 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC3P19447 OR2AH1P-201ENST00000425717 928 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.83□□□□□ -1.48
ERCC3P19447 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.83□□□□□ -1.48
ERCC3P19447 ATP5JP1-201ENST00000431631 322 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 GTF2IP20-201ENST00000431663 360 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 BX323845.1-201ENST00000432417 179 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 RPL19P16-201ENST00000433839 588 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC3P19447 RPL21P133-201ENST00000443666 476 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC3P19447 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC3P19447 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC3P19447 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC3P19447 RNU7-63P-201ENST00000459054 62 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 RNA5SP103-201ENST00000459503 118 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC3P19447 TMEM248P1-201ENST00000510579 951 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC3P19447 RNU7-51P-201ENST00000516560 62 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 RNU6-64P-201ENST00000517119 105 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 HMGB1P41-201ENST00000520234 440 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC3P19447 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.83□□□□□ -1.48
ERCC3P19447 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC3P19447 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms