Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNU6-1148P-201ENST00000410992 104 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AL133384.1-201ENST00000412744 351 ntBASIC5.78□□□□□ -1.48
LIG1P18858 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.78□□□□□ -1.48
LIG1P18858 ATP5JP1-201ENST00000431631 322 ntBASIC5.78□□□□□ -1.48
LIG1P18858 GPR143P-201ENST00000434155 205 ntBASIC5.78□□□□□ -1.48
LIG1P18858 PTMAP6-201ENST00000439110 327 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.78□□□□□ -1.48
LIG1P18858 AC091180.1-201ENST00000462104 372 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.78□□□□□ -1.48
LIG1P18858 RN7SL727P-201ENST00000482164 296 ntBASIC5.78□□□□□ -1.48
LIG1P18858 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.78□□□□□ -1.48
LIG1P18858 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AC012400.1-201ENST00000518452 381 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.78□□□□□ -1.48
LIG1P18858 AC022616.3-201ENST00000523940 148 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.78□□□□□ -1.48
LIG1P18858 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.78□□□□□ -1.48
LIG1P18858 AC093249.1-201ENST00000567049 203 ntBASIC5.78□□□□□ -1.48
LIG1P18858 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LIG1P18858 LARP7P2-201ENST00000575306 125 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.78□□□□□ -1.48
LIG1P18858 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.78□□□□□ -1.48
LIG1P18858 AC115085.1-201ENST00000588924 229 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AL121612.2-201ENST00000612261 482 ntBASIC5.78□□□□□ -1.48
LIG1P18858 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.78□□□□□ -1.48
LIG1P18858 AL023881.1-201ENST00000621088 301 ntBASIC5.78□□□□□ -1.48
LIG1P18858 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.78□□□□□ -1.48
LIG1P18858 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.78□□□□□ -1.48
LIG1P18858 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.78□□□□□ -1.48
LIG1P18858 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LIG1P18858 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LIG1P18858 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.78□□□□□ -1.48
LIG1P18858 AC134882.1-201ENST00000603738 1676 ntBASIC5.78□□□□□ -1.48
LIG1P18858 RIOK3P1-201ENST00000418778 1528 ntBASIC5.78□□□□□ -1.48
LIG1P18858 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LIG1P18858 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIG1P18858 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.48
LIG1P18858 KPNA2P2-201ENST00000419546 1489 ntBASIC5.77□□□□□ -1.49
LIG1P18858 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.49
LIG1P18858 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LIG1P18858 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.77□□□□□ -1.49
LIG1P18858 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
LIG1P18858 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.77□□□□□ -1.49
LIG1P18858 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
LIG1P18858 NACAP2-201ENST00000318548 624 ntBASIC5.77□□□□□ -1.49
LIG1P18858 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
LIG1P18858 Y_RNA.128-201ENST00000363391 112 ntBASIC5.77□□□□□ -1.49
LIG1P18858 Y_RNA.184-201ENST00000363884 108 ntBASIC5.77□□□□□ -1.49
LIG1P18858 RNU6-921P-201ENST00000384361 107 ntBASIC5.77□□□□□ -1.49
LIG1P18858 SNORA75.4-201ENST00000391278 119 ntBASIC5.77□□□□□ -1.49
LIG1P18858 MIR548P-201ENST00000408336 84 ntBASIC5.77□□□□□ -1.49
LIG1P18858 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.77□□□□□ -1.49
LIG1P18858 RNU2-9P-201ENST00000410194 145 ntBASIC5.77□□□□□ -1.49
LIG1P18858 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.77□□□□□ -1.49
LIG1P18858 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.77□□□□□ -1.49
LIG1P18858 RPL26P29-201ENST00000415623 438 ntBASIC5.77□□□□□ -1.49
LIG1P18858 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.77□□□□□ -1.49
LIG1P18858 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.77□□□□□ -1.49
LIG1P18858 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.77□□□□□ -1.49
LIG1P18858 RPL23AP74-201ENST00000437246 471 ntBASIC5.77□□□□□ -1.49
LIG1P18858 HMGB1P18-201ENST00000438801 619 ntBASIC5.77□□□□□ -1.49
LIG1P18858 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.77□□□□□ -1.49
LIG1P18858 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.77□□□□□ -1.49
LIG1P18858 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.77□□□□□ -1.49
LIG1P18858 AL691482.1-201ENST00000453255 87 ntBASIC5.77□□□□□ -1.49
LIG1P18858 MTCO2P29-201ENST00000465212 189 ntBASIC5.77□□□□□ -1.49
LIG1P18858 PABPC1P3-201ENST00000469174 459 ntBASIC5.77□□□□□ -1.49
LIG1P18858 AC006511.1-201ENST00000470614 315 ntBASIC5.77□□□□□ -1.49
LIG1P18858 AC010683.1-201ENST00000473673 378 ntBASIC5.77□□□□□ -1.49
LIG1P18858 RPSAP50-201ENST00000481955 852 ntBASIC5.77□□□□□ -1.49
LIG1P18858 TMEM248P1-201ENST00000510579 951 ntBASIC5.77□□□□□ -1.49
LIG1P18858 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.77□□□□□ -1.49
LIG1P18858 AC090572.1-201ENST00000519251 160 ntBASIC5.77□□□□□ -1.49
LIG1P18858 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.77□□□□□ -1.49
LIG1P18858 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.77□□□□□ -1.49
LIG1P18858 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.77□□□□□ -1.49
LIG1P18858 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.77□□□□□ -1.49
LIG1P18858 NDUFB4P11-201ENST00000560510 395 ntBASIC5.77□□□□□ -1.49
LIG1P18858 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.77□□□□□ -1.49
LIG1P18858 RN7SL435P-201ENST00000584418 282 ntBASIC5.77□□□□□ -1.49
LIG1P18858 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.77□□□□□ -1.49
LIG1P18858 AC106900.2-201ENST00000604994 317 ntBASIC5.77□□□□□ -1.49
LIG1P18858 AC021646.1-201ENST00000605469 484 ntBASIC5.77□□□□□ -1.49
LIG1P18858 AC090948.1-201ENST00000607464 549 ntBASIC5.77□□□□□ -1.49
LIG1P18858 AC093913.1-201ENST00000614178 329 ntBASIC5.77□□□□□ -1.49
LIG1P18858 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.77□□□□□ -1.49
LIG1P18858 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIG1P18858 MTCO1P9-201ENST00000505577 1534 ntBASIC5.77□□□□□ -1.49
LIG1P18858 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIG1P18858 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LIG1P18858 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LIG1P18858 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIG1P18858 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LIG1P18858 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LIG1P18858 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LIG1P18858 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIG1P18858 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.77□□□□□ -1.49
LIG1P18858 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.77□□□□□ -1.49
LIG1P18858 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms