Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL365396.1-201ENST00000430854 671 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFRAP16234 RPL23AP76-201ENST00000441860 458 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 RPL39P6-201ENST00000448289 150 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 USP9YP34-201ENST00000453983 808 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.79□□□□□ -1.8
PDGFRAP16234 AC005410.1-202ENST00000460347 485 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFRAP16234 HMGB1P22-201ENST00000505315 124 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 AC104619.4-201ENST00000510773 249 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.79□□□□□ -1.8
PDGFRAP16234 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.79□□□□□ -1.8
PDGFRAP16234 AL121576.1-201ENST00000556055 276 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 AC012182.1-201ENST00000570133 895 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.79□□□□□ -1.8
PDGFRAP16234 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFRAP16234 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFRAP16234 AC006077.1-201ENST00000604746 343 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 AC006213.4-201ENST00000616184 634 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFRAP16234 U6.101-201ENST00000637707 76 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 OR8B1P-202ENST00000641132 1178 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PDGFRAP16234 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFRAP16234 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFRAP16234 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFRAP16234 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFRAP16234 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 RNU6-1249P-201ENST00000363237 111 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 RNA5SP42-201ENST00000364278 115 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 RNU6-283P-201ENST00000364788 107 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFRAP16234 SNRPEP2-201ENST00000397592 279 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 RNA5SP80-201ENST00000410475 111 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AIMP1P1-201ENST00000418670 937 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AC069157.1-201ENST00000421749 137 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AL389915.1-201ENST00000422463 466 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AC006989.1-201ENST00000427212 131 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AC092427.1-201ENST00000439177 601 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AL645638.1-201ENST00000440519 361 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AL662791.1-201ENST00000441992 928 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFRAP16234 VN1R34P-201ENST00000447387 883 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 RPS3AP46-201ENST00000448352 682 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.78□□□□□ -1.8
PDGFRAP16234 AC092155.2-201ENST00000454675 477 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 ACTG1P13-201ENST00000486987 1043 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFRAP16234 HMGB1P28-201ENST00000507778 552 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFRAP16234 AC026403.1-201ENST00000518938 295 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.78□□□□□ -1.8
PDGFRAP16234 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.78□□□□□ -1.8
PDGFRAP16234 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.78□□□□□ -1.8
PDGFRAP16234 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFRAP16234 AL049838.1-201ENST00000563647 981 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFRAP16234 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.78□□□□□ -1.8
PDGFRAP16234 AP001269.3-201ENST00000588718 329 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFRAP16234 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.78□□□□□ -1.8
PDGFRAP16234 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 AC040168.1-201ENST00000623594 991 ntBASIC3.78□□□□□ -1.8
PDGFRAP16234 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFRAP16234 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFRAP16234 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFRAP16234 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFRAP16234 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
PDGFRAP16234 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
PDGFRAP16234 AL161912.2-201ENST00000565707 3007 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFRAP16234 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFRAP16234 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFRAP16234 RNU4-92P-201ENST00000363783 136 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 MIR591-201ENST00000385290 95 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AC068533.2-201ENST00000411872 306 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 RHEBP3-201ENST00000411920 351 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 SYF2P2-201ENST00000417620 583 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 USP9YP11-201ENST00000427537 717 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AC091286.1-201ENST00000431233 461 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AL050321.1-201ENST00000432363 400 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.77□□□□□ -1.81
PDGFRAP16234 RPL23AP74-201ENST00000437246 471 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 MTCYBP31-201ENST00000438855 1122 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFRAP16234 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.77□□□□□ -1.81
PDGFRAP16234 AL445669.2-201ENST00000454425 421 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 snoU109.4-201ENST00000458953 143 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 RN7SL330P-201ENST00000469709 307 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 VN1R17P-201ENST00000472048 1090 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFRAP16234 SLC25A15P5-201ENST00000508033 253 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFRAP16234 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFRAP16234 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFRAP16234 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFRAP16234 RNU6-579P-201ENST00000516879 102 ntBASIC3.77□□□□□ -1.81
PDGFRAP16234 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFRAP16234 AC104986.1-201ENST00000517978 436 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms