Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.39□□□□□ -1.23
CD44P16070 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CD44P16070 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.39□□□□□ -1.23
CD44P16070 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.39□□□□□ -1.23
CD44P16070 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC7.38□□□□□ -1.23
CD44P16070 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.38□□□□□ -1.23
CD44P16070 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.38□□□□□ -1.23
CD44P16070 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 BTBD10P1-201ENST00000549824 1352 ntBASIC7.38□□□□□ -1.23
CD44P16070 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 RNA5SP333-201ENST00000363466 118 ntBASIC7.38□□□□□ -1.23
CD44P16070 RNA5SP234-201ENST00000363916 119 ntBASIC7.38□□□□□ -1.23
CD44P16070 RNU6-1164P-201ENST00000364428 107 ntBASIC7.38□□□□□ -1.23
CD44P16070 Y_RNA.251-201ENST00000364551 99 ntBASIC7.38□□□□□ -1.23
CD44P16070 RNA5SP334-201ENST00000364825 118 ntBASIC7.38□□□□□ -1.23
CD44P16070 Y_RNA.630-201ENST00000411370 108 ntBASIC7.38□□□□□ -1.23
CD44P16070 RPS3AP1-201ENST00000413190 320 ntBASIC7.38□□□□□ -1.23
CD44P16070 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC7.38□□□□□ -1.23
CD44P16070 CEACAMP1-201ENST00000434624 1035 ntBASIC7.38□□□□□ -1.23
CD44P16070 USP9YP7-201ENST00000436723 430 ntBASIC7.38□□□□□ -1.23
CD44P16070 MRPL48P1-201ENST00000445390 636 ntBASIC7.38□□□□□ -1.23
CD44P16070 PFN1P11-201ENST00000445829 389 ntBASIC7.38□□□□□ -1.23
CD44P16070 AC073587.1-201ENST00000447093 876 ntBASIC7.38□□□□□ -1.23
CD44P16070 USP9YP32-201ENST00000452432 430 ntBASIC7.38□□□□□ -1.23
CD44P16070 AC114755.1-201ENST00000453101 868 ntBASIC7.38□□□□□ -1.23
CD44P16070 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC7.38□□□□□ -1.23
CD44P16070 AC098583.1-201ENST00000480875 255 ntBASIC7.38□□□□□ -1.23
CD44P16070 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC7.38□□□□□ -1.23
CD44P16070 ENPP7P3-201ENST00000509123 241 ntBASIC7.38□□□□□ -1.23
CD44P16070 AC083906.1-201ENST00000509298 406 ntBASIC7.38□□□□□ -1.23
CD44P16070 AC108471.1-201ENST00000513977 287 ntBASIC7.38□□□□□ -1.23
CD44P16070 RNU5F-2P-201ENST00000516066 82 ntBASIC7.38□□□□□ -1.23
CD44P16070 CARSP2-201ENST00000520688 277 ntBASIC7.38□□□□□ -1.23
CD44P16070 IGLV3-6-201ENST00000523937 250 ntBASIC7.38□□□□□ -1.23
CD44P16070 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC7.38□□□□□ -1.23
CD44P16070 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.38□□□□□ -1.23
CD44P16070 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.38□□□□□ -1.23
CD44P16070 AC005332.9-201ENST00000620266 2921 ntBASIC7.38□□□□□ -1.23
CD44P16070 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
CD44P16070 ADAM5-202ENST00000399789 1942 ntBASIC7.38□□□□□ -1.23
CD44P16070 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.38□□□□□ -1.23
CD44P16070 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CD44P16070 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.37□□□□□ -1.23
CD44P16070 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CD44P16070 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CD44P16070 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.37□□□□□ -1.23
CD44P16070 AC105749.1-201ENST00000631338 2008 ntBASIC7.37□□□□□ -1.23
CD44P16070 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
CD44P16070 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 SNORD114-19-201ENST00000363072 75 ntBASIC7.37□□□□□ -1.23
CD44P16070 RNY1P11-201ENST00000363759 113 ntBASIC7.37□□□□□ -1.23
CD44P16070 RNU6-961P-201ENST00000363893 105 ntBASIC7.37□□□□□ -1.23
CD44P16070 RNU6-213P-201ENST00000384051 104 ntBASIC7.37□□□□□ -1.23
CD44P16070 AL590635.1-201ENST00000406314 586 ntBASIC7.37□□□□□ -1.23
CD44P16070 Z95327.1-201ENST00000446082 482 ntBASIC7.37□□□□□ -1.23
CD44P16070 RPL7L1P1-201ENST00000448259 785 ntBASIC7.37□□□□□ -1.23
CD44P16070 RPS26P11-201ENST00000463445 348 ntBASIC7.37□□□□□ -1.23
CD44P16070 RPS29P27-201ENST00000463711 170 ntBASIC7.37□□□□□ -1.23
CD44P16070 RPS26P6-201ENST00000475156 348 ntBASIC7.37□□□□□ -1.23
CD44P16070 RN7SKP67-201ENST00000515905 235 ntBASIC7.37□□□□□ -1.23
CD44P16070 AC109810.1-201ENST00000534066 224 ntBASIC7.37□□□□□ -1.23
CD44P16070 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.37□□□□□ -1.23
CD44P16070 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.37□□□□□ -1.23
CD44P16070 RMST_4.1-201ENST00000616886 107 ntBASIC7.37□□□□□ -1.23
CD44P16070 DLST-216ENST00000626051 252 ntTSL 5 BASIC7.37□□□□□ -1.23
CD44P16070 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.37□□□□□ -1.23
CD44P16070 TMEM75-201ENST00000624314 2165 ntBASIC7.37□□□□□ -1.23
CD44P16070 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC7.37□□□□□ -1.23
CD44P16070 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.37□□□□□ -1.23
CD44P16070 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.37□□□□□ -1.23
CD44P16070 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CD44P16070 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC7.37□□□□□ -1.23
CD44P16070 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms