Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CSB-PGBD3P0DP91 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AL645937.1-202ENST00000421799 937 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC010326.1-201ENST00000462726 602 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 PCBP2P3-201ENST00000509726 843 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC026782.1-201ENST00000512952 449 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 FRG2DP-202ENST00000566967 323 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC008966.2-201ENST00000606157 453 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AL627309.6-201ENST00000606857 840 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC019193.3-201ENST00000609144 554 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC011978.2-201ENST00000569835 2054 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AL122126.1-201ENST00000546905 1318 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 AC004076.2-201ENST00000620532 3323 ntBASIC6.7□□□□□ -1.34
CSB-PGBD3P0DP91 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC083899.1-201ENST00000454465 3819 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 MTND5P33-201ENST00000571250 1450 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 SNORA70.2-201ENST00000364506 135 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 RNA5SP223-201ENST00000365174 120 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC068538.1-201ENST00000376856 336 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 Z98949.2-201ENST00000440996 144 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC010733.1-201ENST00000451515 401 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 RPL12P20-201ENST00000475538 479 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 RNU6-1314P-201ENST00000517139 104 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 Y_RNA.720-201ENST00000517166 92 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC009643.1-201ENST00000532030 391 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC024224.1-201ENST00000538284 609 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 TOMM20P2-201ENST00000540082 421 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC004817.2-201ENST00000561794 651 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AL669831.4-202ENST00000590817 238 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 XIAPP1-201ENST00000603162 600 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC080078.3-201ENST00000605407 463 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC093913.1-201ENST00000614178 329 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 MTND4LP32-201ENST00000636111 270 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 A2MP1-204ENST00000566278 4130 ntBASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CSB-PGBD3P0DP91 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms